Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGTTGCTTGAATATCACCTGCTTACTCTAGTCTGTCACATTTCCATTCTGTTGCTTGCGGTCTTATTTTTGTGGTCCAATGCCCATACCTTTATTCACAAgtaagactctaggactcattgatctattgtgccgaggcatagttgcctacaggctatgattatttccaaccaatttgcatgtaatatcgaataatgttgcag

Basic information

species Glycine max
transcript GLYMA07G06830.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|16344603|gb|BI970198.1|BI970198
EST:     TTGCTTGCGGTTTTATTTTTGTGGTCCAATGCCCATACCTTTATTCACAA                         GGCACCACCTCGCATCCCGGTTGTTCATATCCCCGAAGAACCAATTCTCCA
genomic: TTGCTTGCGGTCTTATTTTTGTGGTCCAATGCCCATACCTTTATTCACAAgtaagactct ... aatgttgcagGGCACCACCTCGCATCCCGGTTGTTCATATCCCCGAAGAACCAATTCTCCA
EST: gi|16346040|gb|BI971635.1|BI971635
EST:     TTGCTTGCGGTCTTATTTTTGTGGTCCAATGCCCATACCTTTATTCACAA                         GGCACCACCTCGCATCCCGGTTGTTCATATCCCCGAAGAACCAATTCTCCA
genomic: TTGCTTGCGGTCTTATTTTTGTGGTCCAATGCCCATACCTTTATTCACAAgtaagactct ... aatgttgcagGGCACCACCTCGCATCCCGGTTGTTCATATCCCCGAAGAACCAATTCTCCA
EST: gi|16346266|gb|BI971861.1|BI971861
EST:     TGCTTGCGGTCTTATTTTTGTGGTCCAATGCCCATACCCTTTATTCACA-                         GGCACCACCTCCCATCCCGGTTGGTCATATCCCCGAAGAAC-AATTCTCCA
genomic: TGCTTGCGGTCTTATTTTTGTGGTCCAATGCCCATACC-TTTATTCACAAgtaagactct ... aatgttgcagGGCACCACCTCGCATCCCGGTTGTTCATATCCCCGAAGAACCAATTCTCCA
EST: gi|298188195|gb|HO034888.1|HO034888
EST:     TTGCTTGCGGTTTTATTTTTGTGGTCCAATGCCCATACCTTTATTCACAA                         GGCACCACCTCGCATCCCGGTTGTTCATATCCCCGAAGAACCAATTCTCCA
genomic: TTGCTTGCGGTCTTATTTTTGTGGTCCAATGCCCATACCTTTATTCACAAgtaagactct ... aatgttgcagGGCACCACCTCGCATCCCGGTTGTTCATATCCCCGAAGAACCAATTCTCCA
EST: gi|151403313|gb|EV273123.1|EV273123
EST:     TTGCTTGCGGTCTTATTTTTGTGGTCCAATGCCCATACCTTTATTCACAA                         GGCACCACCTCGCATCCCGGTTGTTCATATCCCCGAAGAACCAATTCTCCA
genomic: TTGCTTGCGGTCTTATTTTTGTGGTCCAATGCCCATACCTTTATTCACAAgtaagactct ... aatgttgcagGGCACCACCTCGCATCCCGGTTGTTCATATCCCCGAAGAACCAATTCTCCA
EST: gi|192325037|gb|FK016163.1|FK016163
EST:     TTGCTTGCGGTCTTATTTTTGTGGTCCAATGCCCATACCTTTATTCACAA                         GGCACCACCTCGCATCCCGGTTGTTCATATCCCCGAAGAACCAATTCTCCA
genomic: TTGCTTGCGGTCTTATTTTTGTGGTCCAATGCCCATACCTTTATTCACAAgtaagactct ... aatgttgcagGGCACCACCTCGCATCCCGGTTGTTCATATCCCCGAAGAACCAATTCTCCA
EST: gi|213603142|gb|DB960433.1|DB960433
EST:     TTGCTTGCGGTTTTATTTTTGTGGTCCAATGCCCATACCTTTATTCACAA                         GGCACCACCTCGCATCCCGG
genomic: TTGCTTGCGGTCTTATTTTTGTGGTCCAATGCCCATACCTTTATTCACAAgtaagactct ... aatgttgcagGGCACCACCTCGCATCCCGG
EST: gi|7924253|gb|AW830279.1|AW830279
EST:     TTGCTTGCGGTTTTATTTTTGTGGTCCAATGCCCATACCTTTATTCACAA                         GGCACCACCTCGCATCCCGGTTGTTCATATCCCCGAAGAACCAATTCTC
genomic: TTGCTTGCGGTCTTATTTTTGTGGTCCAATGCCCATACCTTTATTCACAAgtaagactct ... aatgttgcagGGCACCACCTCGCATCCCGGTTGTTCATATCCCCGAAGAACCAATTCTC
EST: gi|7924561|gb|AW830587.1|AW830587
EST:     TTGCTTGCGGTTTTATTTTTGTGGTCCAATGCCCATACCTTTATTCACAA                         GGCACCACCTCGCATGCCGGTTGTTCATATCCCC
genomic: TTGCTTGCGGTCTTATTTTTGTGGTCCAATGCCCATACCTTTATTCACAAgtaagactct ... aatgttgcagGGCACCACCTCGCATCCCGGTTGTTCATATCCCC
EST: gi|26057729|gb|CA800643.1|CA800643
EST:     TGCGGTTTTATTTTTGTGGTCCAATGCCCATACCTTTATTCACAA                         GGCACCACCTCGCATCCCGGTTGTTCATATCCCCGAAGAACCAATTCTCCA
genomic: TGCGGTCTTATTTTTGTGGTCCAATGCCCATACCTTTATTCACAAgtaagactct ... aatgttgcagGGCACCACCTCGCATCCCGGTTGTTCATATCCCCGAAGAACCAATTCTCCA
EST: gi|213592787|gb|DB957831.1|DB957831
EST:     TTGCTTGCGGTTTTATTTTTGTGGTCCAATGCCCATACCTTTATTCACAA                         GGCACCACCTCGCATCCCGGTTGTTCATATCCCCGAAGAACCAATTCTCCA
genomic: TTGCTTGCGGTCTTATTTTTGTGGTCCAATGCCCATACCTTTATTCACAAgtaagactct ... aatgttgcagGGCACCACCTCGCATCCCGGTTGTTCATATCCCCGAAGAACCAATTCTCCA