1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
ATGTTGAAGATTTTTACAACCAATGTGATCCTGgttagttatactttcttttcatgtagtctttgtgtgcctcaacatttgtgtttttgaatagtcaattggcttttaacttattgtaaggatgaatgtgaaa...
species | Glycine max |
transcript | GLYMA07G04040.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: ATGTTGAAGATTTTTACAACCAATGTGATCCTG AGAAAGAGAATTTGTGCTTGTATGGCTTTCCCAGTGAGCAGTGGGAAGTAAEST: gi|208308763|gb|GE104585.1|GE104585
genomic: ATGTTGAAGATTTTTACAACCAATGTGATCCTGgttagttata ... attctttcagAGAAAGAGAATTTGTGCTTGTATGGCTTTCCCAGTGAGCAGTGGGAAGTAA
EST: ATGTTGAAGATTTTTACAACCAATGTGATCCTG AGAAAGAGAATTTGTGCTTGTATGGCTTTCCCEST: gi|192297449|gb|FG989513.1|FG989513
genomic: ATGTTGAAGATTTTTACAACCAATGTGATCCTGgttagttata ... attctttcagAGAAAGAGAATTTGTGCTTGTATGGCTTTCCC
EST: ATGTTGAAGATTTTTACAACCAATGTGATCCTG AGAAAGAGAATTTGTGCTTGTATGGCTTTCCCAGTGAGCAGTGGGAAGTAAEST: gi|298192744|gb|HO033178.1|HO033178
genomic: ATGTTGAAGATTTTTACAACCAATGTGATCCTGgttagttata ... attctttcagAGAAAGAGAATTTGTGCTTGTATGGCTTTCCCAGTGAGCAGTGGGAAGTAA
EST: ATGTTGAAGATTTTTACAACCAATGTGATCCTG AGAAAGAGAATTTGTGCTTGTATGGCTTTCCCAGTGAGCAGTGGGAAGTAAEST: gi|192333136|gb|FK026465.1|FK026465
genomic: ATGTTGAAGATTTTTACAACCAATGTGATCCTGgttagttata ... attctttcagAGAAAGAGAATTTGTGCTTGTATGGCTTTCCCAGTGAGCAGTGGGAAGTAA
EST: ATGTTGAAGATTTTTACAACCAATGTGATCCTG AGAAAGAGAATTTGTGCTTGTATGGCTTTCCCAGTGAGCAGTGGGAAGTAAEST: gi|298172302|gb|HO019342.1|HO019342
genomic: ATGTTGAAGATTTTTACAACCAATGTGATCCTGgttagttata ... attctttcagAGAAAGAGAATTTGTGCTTGTATGGCTTTCCCAGTGAGCAGTGGGAAGTAA
EST: ATGTTGAAGATTTTTACAACCAATGTGATCCTG AGAAAGAGAATTTGTGCTTGTATGGCTTTCCCAGTGAGCAGTGGGAAGTAAEST: gi|151405473|gb|EV275287.1|EV275287
genomic: ATGTTGAAGATTTTTACAACCAATGTGATCCTGgttagttata ... attctttcagAGAAAGAGAATTTGTGCTTGTATGGCTTTCCCAGTGAGCAGTGGGAAGTAA
EST: ATGTTGAAGATTTTTACAACCAATGTGATCCTG AGAAAGAGAATTTGTGCTTGCATGGCTTTCCCAGTGAGCAGTGGGAAGTAAEST: gi|58014682|gb|CX701424.1|CX701424
genomic: ATGTTGAAGATTTTTACAACCAATGTGATCCTGgttagttata ... attctttcagAGAAAGAGAATTTGTGCTTGTATGGCTTTCCCAGTGAGCAGTGGGAAGTAA
EST: CTGATGTTGAAGATTTTTCCAACCAATGTGATCCTG AGAAAGAGATTTTGTGCTGGTATGGCTTTCCCAGTGAGCAGTGGAAAGTAAEST: gi|18039623|gb|BM307917.1|BM307917
genomic: CTGATGTTGAAGATTTTTACAACCAATGTGATCCTGgttagttata ... attctttcagAGAAAGAGAATTTGTGCTTGTATGGCTTTCCCAGTGAGCAGTGGGAAGTAA
EST: ATGTTGAAGATTTTTACAACCAATGTGATCCTG AGAAAGAGAATTTGTGCTTGTATGGCTTTCCCAGTGAGCAGTGGGAAGTAAEST: gi|208167333|gb|GD960841.1|GD960841
genomic: ATGTTGAAGATTTTTACAACCAATGTGATCCTGgttagttata ... attctttcagAGAAAGAGAATTTGTGCTTGTATGGCTTTCCCAGTGAGCAGTGGGAAGTAA
EST: TTTTTACAACCAATGTGATCCTG AGAAAGAGAATTTGTGCTTGTATGGCTTTCCCAGTGAGCAGTGGGAAGTAAEST: gi|120532679|gb|EH260812.1|EH260812
genomic: TTTTTACAACCAATGTGATCCTGgttagttata ... attctttcagAGAAAGAGAATTTGTGCTTGTATGGCTTTCCCAGTGAGCAGTGGGAAGTAA
EST: ATGTTGAAGATTTTTACAACCAATGTGATCCTG AGAAAGAGAATTTGTGCTTGTATGGCTTTCCCAGTGAGCAGTGGGAAGTAA
genomic: ATGTTGAAGATTTTTACAACCAATGTGATCCTGgttagttata ... attctttcagAGAAAGAGAATTTGTGCTTGTATGGCTTTCCCAGTGAGCAGTGGGAAGTAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGTTGAAGATTTTTACAACCAATGTGATCCTGgttagttatactttcttttcatgtagtctttgtgtgcctcaacatttgtgtttttgaatagtcaattggcttttaacttattgtaaggatgaatgtgaaa
- TTGAAG
- - TGAAGA