1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
AGGATGCTACTGCGATCAAAAAGAAGGTTGAGGACATAATGCCAATCGCTACTGGCCACGAGCGCGAGGAGCTTCAGGCTGAGCTCGAGgtctctctcgattctatcaaatgcattccttactctcatctgtgccctatattttagaccaaaactggggggttctgttagtaattagcttatttactct...
species | Glycine max |
transcript | GLYMA07G03680.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TGCCAATCGCTACTGGCCACGAGCGCGAGGAGCTTCAGGCTGAGCTCGAG GGAAGGAATATTCTTGAAATAGACCATCCCGAAGGTCCATTCGGCACAAAGEST: gi|14126582|gb|BG791020.1|BG791020
genomic: TGCCAATCGCTACTGGCCACGAGCGCGAGGAGCTTCAGGCTGAGCTCGAGgtctctctcg ... ttttggttagGGAAGGAATATTCTTGAAATAGACCATCCCGAAGGTCCATTCGGCACAAAG
EST: TGCCAATCGCTACTGGCCACGAGCGCGAGGAGCTTCAGGCTGAGCTCGAG GGAAGGAATATTCTTGAAATAGACCATCCCGAAGGTCCATTCGGCACAAAGEST: gi|31308540|gb|CD393743.1|CD393743
genomic: TGCCAATCGCTACTGGCCACGAGCGCGAGGAGCTTCAGGCTGAGCTCGAGgtctctctcg ... ttttggttagGGAAGGAATATTCTTGAAATAGACCATCCCGAAGGTCCATTCGGCACAAAG
EST: TGCCAATCGCTACTGGCCACGAGCGCGAGGAGCTTCAGGCTGAGCTCGAG GGAAGGAATATTCTTGAAATAGACCATCCCGAAGGTCCATTCGGCACAAAGEST: gi|120496630|gb|EH224797.1|EH224797
genomic: TGCCAATCGCTACTGGCCACGAGCGCGAGGAGCTTCAGGCTGAGCTCGAGgtctctctcg ... ttttggttagGGAAGGAATATTCTTGAAATAGACCATCCCGAAGGTCCATTCGGCACAAAG
EST: TGCCAATCGCTACTGGCCACGAGCGCGAGGAGCTTCAGGCTGAGCTCGAG GGAAGGAATATTCTTGAAATAGACCATCCCGAAGGTCCATTCGGCACAAAGEST: gi|192330937|gb|FK023110.1|FK023110
genomic: TGCCAATCGCTACTGGCCACGAGCGCGAGGAGCTTCAGGCTGAGCTCGAGgtctctctcg ... ttttggttagGGAAGGAATATTCTTGAAATAGACCATCCCGAAGGTCCATTCGGCACAAAG
EST: TGGCCACGAGCGCGAGGAGCTTCAGGCTGAGCTCGAG GGAAGGAATATTCTTGAAATAGACCATCCCGAAGGTCCATTCGGCACAAAGEST: gi|31306843|gb|CD392046.1|CD392046
genomic: TGGCCACGAGCGCGAGGAGCTTCAGGCTGAGCTCGAGgtctctctcg ... ttttggttagGGAAGGAATATTCTTGAAATAGACCATCCCGAAGGTCCATTCGGCACAAAG
EST: ATCGCTACTGGCCACGAGCGCGAGGAGCTTCAGGCTGAGCTCGAG GGAAGGAATATTCTTGAAATAGACCATCCCGAAGGTCCATTCGGCACAAAGEST: gi|58024911|gb|CX711652.1|CX711652
genomic: ATCGCTACTGGCCACGAGCGCGAGGAGCTTCAGGCTGAGCTCGAGgtctctctcg ... ttttggttagGGAAGGAATATTCTTGAAATAGACCATCCCGAAGGTCCATTCGGCACAAAG
EST: TGCCAATCGCTACTGGCCACGAGCGCGAGGAGCTTCAGGCTGAGCTCGAG GGAAGGAATATTCTTGAAATAGACCATCCCGAAGGTCCATTCGGCACAAAG
genomic: TGCCAATCGCTACTGGCCACGAGCGCGAGGAGCTTCAGGCTGAGCTCGAGgtctctctcg ... ttttggttagGGAAGGAATATTCTTGAAATAGACCATCCCGAAGGTCCATTCGGCACAAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGGATGCTACTGCGATCAAAAAGAAGGTTGAGGACATAATGCCAATCGCTACTGGCCACGAGCGCGAGGAGCTTCAGGCTGAGCTCGAGgtctctctcgattctatcaaatgcattccttactctcatctgtgccctatattttagaccaaaactggggggttctgttagtaattagcttatttactct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT