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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTCTGATCCCTCCACAGTATGTTCTTGGATCTTCTTCAATTCCTTTTAATTCTTCTACACAAAACCAAGAGCCCCCTCACTCATTGAGCCAACTTCTTTTgtaagcactctctctctctcttctttgtgcatgcctgcagtgtgtggcttcttggtcaatacatatctcccactttttccttttaagtgtttgataaact...

Basic information

species Glycine max
transcript GLYMA07G02120.2
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|6667218|gb|AW278677.1|AW278677
EST:     TCTTCTACACAAAACCAAGAGCCCCCTCACTCATTGAGCCAACTTCTTTT                         CACTGGTTTACCAGGAGAAGAAGAGAGAGTTGCATTCAGTCATTTCCAATC
genomic: TCTTCTACACAAAACCAAGAGCCCCCTCACTCATTGAGCCAACTTCTTTTgtaagcactc ... tgttttgcagCACTGGTTTACCAGGAGAAGAAGAGAGAGTTGCATTCAGTCATTTCCAATC
EST: gi|10845564|gb|BF068658.1|BF068658
EST:     TCTTCTACACAAAACCAAGAGCCCCCTCACTCATTGAGCCAACTTCTTTT                         CACTGGTTTACCAGGAGAAGAAGAGAGAGTTGCATTCAGTCATTTCCAATC
genomic: TCTTCTACACAAAACCAAGAGCCCCCTCACTCATTGAGCCAACTTCTTTTgtaagcactc ... tgttttgcagCACTGGTTTACCAGGAGAAGAAGAGAGAGTTGCATTCAGTCATTTCCAATC
EST: gi|213602541|gb|DB956561.1|DB956561
EST:     TCTTCTACACAAAACCAAGAGCCCCCTCACTCATTGAGCCAACTTCTTTT                         CACTGGTTTACCAGGAGAAGAAGAGAGAGTTGCATTCAGTCATTTCCAATC
genomic: TCTTCTACACAAAACCAAGAGCCCCCTCACTCATTGAGCCAACTTCTTTTgtaagcactc ... tgttttgcagCACTGGTTTACCAGGAGAAGAAGAGAGAGTTGCATTCAGTCATTTCCAATC
EST: gi|209722357|gb|BW665843.1|BW665843
EST:     TCTTCTACACAAAACCGAGAGCCCCCTCACTCATTGAGCCAACTTCTTTT                         CACTGGTTTACCAGGAGAAGAAGAGAGAGTTGCATTCAGTCATTTCCAATC
genomic: TCTTCTACACAAAACCAAGAGCCCCCTCACTCATTGAGCCAACTTCTTTTgtaagcactc ... tgttttgcagCACTGGTTTACCAGGAGAAGAAGAGAGAGTTGCATTCAGTCATTTCCAATC