1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TTACAACTGCAGAAAATGGGCCAAGGGCATTGGAATTATTGGGCTTAACAAGTGGTGGACAGAACACCATGAACGGTgttagtcttctcttttcatattaatcaaagttttatcaacatatgtgaccttgttaacacatataatcttgaccctaagtatgtaatcagaggttcaatc...
species | Glycine max |
transcript | GLYMA06G14750.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CATTGGAATTATTGGGCTTAACAAGTGGTGGACAGAACACCATGAACGGT AGATCCAAAGTAAATATGGTTATCACAGACTATTGCGTGCCAGGGATGACAEST: gi|298177051|gb|HO023412.1|HO023412
genomic: CATTGGAATTATTGGGCTTAACAAGTGGTGGACAGAACACCATGAACGGTgttagtcttc ... tactttgtagAGATCCAAAGTAAATATGGTTATCACAGACTATTGCATGCCAGGGATGACA
EST: CATTGGAATTATTGGGCTTAACAAGTGGTG-ACAGAACACCATGAACGGT AGATCCAAAGTAAATATGGTTATCACAGACTATTGCATGCCAGGGATGACAEST: gi|151406198|gb|EV276013.1|EV276013
genomic: CATTGGAATTATTGGGCTTAACAAGTGGTGGACAGAACACCATGAACGGTgttagtcttc ... tactttgtagAGATCCAAAGTAAATATGGTTATCACAGACTATTGCATGCCAGGGATGACA
EST: CATTGGAATTATTGGGCTTAACAAGTGGTGGACAGAACACCATGAACGGT AGATCCAAAGTAAATATGGTTATCACAGACTATTGCATGCCAGGGATGACAEST: gi|192299552|gb|FG992580.1|FG992580
genomic: CATTGGAATTATTGGGCTTAACAAGTGGTGGACAGAACACCATGAACGGTgttagtcttc ... tactttgtagAGATCCAAAGTAAATATGGTTATCACAGACTATTGCATGCCAGGGATGACA
EST: CATTGGAATTATTGGGCTTAACAAGTGGTGGACAGAACACCATGAACGGT AGATCCAAAGTAAATATGGTTATCACAGACTATTGCATGCCAGGGATGACA
genomic: CATTGGAATTATTGGGCTTAACAAGTGGTGGACAGAACACCATGAACGGTgttagtcttc ... tactttgtagAGATCCAAAGTAAATATGGTTATCACAGACTATTGCATGCCAGGGATGACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTACAACTGCAGAAAATGGGCCAAGGGCATTGGAATTATTGGGCTTAACAAGTGGTGGACAGAACACCATGAACGGTgttagtcttctcttttcatattaatcaaagttttatcaacatatgtgaccttgttaacacatataatcttgaccctaagtatgtaatcagaggttcaatc
- - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA