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ACCCTTATCAAACATGAGTGGTCGCTTTTCTCGCACAATTTATGTTGGCAACCTGCCCTCTGATATAAGAGAGTCAGAAATTGAAGATCTATTCTACAAGgttggatttataattttcttgtacagtatattgtggtgcatccagtgtattatattttgtgcatgttcagttggctttgcctcccatatttctatattaa...
species | Glycine max |
transcript | GLYMA06G14060.3 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: ACCTGCCCTCTGATATAAGAGAGTCAGAAATTGAAGATCTATTCTACAAG TATGGCCGTATAATGGATATTGAATTGAAGGTTCCTCCCCGCCCTCCATGTEST: gi|6916424|gb|AW397954.1|AW397954
genomic: ACCTGCCCTCTGATATAAGAGAGTCAGAAATTGAAGATCTATTCTACAAGgttggattta ... ctcactacagTATGGCCGTATAATGGATATTGAATTGAAGGTTCCTCCCCGCCCTCCATGT
EST: ACCTGCCCTCTGATATAAGAGAGTCAGAAATTGAAGATCTATTCTACAAG TATGGCCGTATAATGGATATTGAATTGAAGGTTCCTCCGCACCCTCCEST: gi|8404233|gb|BE059867.1|BE059867
genomic: ACCTGCCCTCTGATATAAGAGAGTCAGAAATTGAAGATCTATTCTACAAGgttggattta ... ctcactacagTATGGCCGTATAATGGATATTGAATTGAAGGTTCCTCCCCGCCCTCC
EST: ACCTGCCCTCTGATATAAGAGAGTCAGAAATTGAAGATCTATTCTACAAG TATGGCCGTATAATGGATATTGAATTGAAGGTTCCTCCCCGCCCTCCATGTEST: gi|37995795|gb|CF807384.1|CF807384
genomic: ACCTGCCCTCTGATATAAGAGAGTCAGAAATTGAAGATCTATTCTACAAGgttggattta ... ctcactacagTATGGCCGTATAATGGATATTGAATTGAAGGTTCCTCCCCGCCCTCCATGT
EST: ACCTGCCCTCTGATATAAGAGAGTCAGAAATTGAAGATCTATTCTACAAG TATGGCCGTATAATGGATATTGAATTGAAGGTTCCTCCCCGCCCTCCATGTEST: gi|12688674|gb|BG155010.1|BG155010
genomic: ACCTGCCCTCTGATATAAGAGAGTCAGAAATTGAAGATCTATTCTACAAGgttggattta ... ctcactacagTATGGCCGTATAATGGATATTGAATTGAAGGTTCCTCCCCGCCCTCCATGT
EST: ACCTGCCCTCTGATATAAGAGAGTCAGAAATTGAAGATCTATTCTACAAG TATGGCCG-ATAATGGATATTGAATTGAAGGTTCCTCCCCGCCCTCCATGT
genomic: ACCTGCCCTCTGATATAAGAGAGTCAGAAATTGAAGATCTATTCTACAAGgttggattta ... ctcactacagTATGGCCGTATAATGGATATTGAATTGAAGGTTCCTCCCCGCCCTCCATGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACCCTTATCAAACATGAGTGGTCGCTTTTCTCGCACAATTTATGTTGGCAACCTGCCCTCTGATATAAGAGAGTCAGAAATTGAAGATCTATTCTACAAGgttggatttataattttcttgtacagtatattgtggtgcatccagtgtattatattttgtgcatgttcagttggctttgcctcccatatttctatattaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA