1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
ATGCTTGCCAAAGCTATTGCCAAGGAGTCCAGAGCAGTTTTTATTAACGTGAGAATATCAAACCTGATGAGCAAGTGGTTTGGGGATGCCCAAAAGCTTGgtaagtgcacaatgtctttatggctacttttacagtacactgtaaagctatactctaccgtctacaatacactgtagtatcttcaccattgaatttttgt...
species | Glycine max |
transcript | GLYMA06G13800.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GAGAATATCAAACCTGATGAGCAAGTGGTTTGGGGATGCCCAAAAGCTTG TTGCTGCTGTATTTAAGCTTGGCTTATEST: gi|254332455|gb|GR843932.1|GR843932
genomic: GAGAATATCAAACCTGATGAGCAAGTGGTTTGGGGATGCCCAAAAGCTTGgtaagtgcac ... tgctctgcagTTGCTGCTGTATTTA-GCTTGGCTTAT
EST: GAGAATATCAAACCTGATGAGCAAGTGGTTTGGGGATGCCCAAAAGCTTG TTGCTGCTGTATTTAGCTTGGCTTATAAGCTTCAGCCTGCCATCATATTCAEST: gi|5606071|gb|AI900169.1|AI900169
genomic: GAGAATATCAAACCTGATGAGCAAGTGGTTTGGGGATGCCCAAAAGCTTGgtaagtgcac ... tgctctgcagTTGCTGCTGTATTTAGCTTGGCTTATAAGCTTCAGCCTGCCATCATATTCA
EST: AGAATATCANACCTGATNGAGCA-GTGGTTTTGGGATGCCCAAAAGCTTG TTGCTGCTGTATTTAGCTTGGCTTATAAGCTTCAGCCTGCCATCATATTCAEST: gi|193348000|gb|FK311812.1|FK311812
genomic: AGAATATCAAACCTGAT-GAGCAAGTGGTTTGGGGATGCCCAAAAGCTTGgtaagtgcac ... tgctctgcagTTGCTGCTGTATTTAGCTTGGCTTATAAGCTTCAGCCTGCCATCATATTCA
EST: GAGAATATCAAACCTGATGAGCAAGTGGTTTGGGGATGCCCAAAAGCTTG TTGCTGCTGTATTTAGCTTGGCTTATEST: gi|151412804|gb|EV282616.1|EV282616
genomic: GAGAATATCAAACCTGATGAGCAAGTGGTTTGGGGATGCCCAAAAGCTTGgtaagtgcac ... tgctctgcagTTGCTGCTGTATTTAGCTTGGCTTAT
EST: GAGAATATCAAACCTGATGAGCAAGTGGTTTGGGGATGCCCAAAAGCTTG TTGCTGCTGTATTTAGCTTGGCTTATAAGCTTCAGCCTGCCATCATATTCAEST: gi|192324866|gb|FK015362.1|FK015362
genomic: GAGAATATCAAACCTGATGAGCAAGTGGTTTGGGGATGCCCAAAAGCTTGgtaagtgcac ... tgctctgcagTTGCTGCTGTATTTAGCTTGGCTTATAAGCTTCAGCCTGCCATCATATTCA
EST: AGAATATCAAACCTGATGAGCAAGTGGTTTGGGGGATGCCCAAAAGCTTG TTGCTGCTGTATTTAGCTTGGCTTATAAGCTTCAGCCTGCCATCATATTCAEST: gi|11687417|gb|BF595093.1|BF595093
genomic: AGAATATCAAACCTGATGAGCAAGTGGTTTGGGG-ATGCCCAAAAGCTTGgtaagtgcac ... tgctctgcagTTGCTGCTGTATTTAGCTTGGCTTATAAGCTTCAGCCTGCCATCATATTCA
EST: GAGAATATCAAACCTGATGAGCAAGTGGTTTGGGGATGCCCAAAAGCTTG TTGCTGCTGTATTTAGCTTGGCTTATAAGCTTCAGCCTGCCATCATATTCAEST: gi|7638877|gb|AW733269.1|AW733269
genomic: GAGAATATCAAACCTGATGAGCAAGTGGTTTGGGGATGCCCAAAAGCTTGgtaagtgcac ... tgctctgcagTTGCTGCTGTATTTAGCTTGGCTTATAAGCTTCAGCCTGCCATCATATTCA
EST: GAGAATATCAAACCTGATGAGCAAGTGGTTTGGGGATGCCCAAAAGCTAG TTGCTGCTGTATTTAGCTTGGCTTATAAGCTTCAGCCTGCCATCATATTCAEST: gi|208318942|gb|GE112011.1|GE112011
genomic: GAGAATATCAAACCTGATGAGCAAGTGGTTTGGGGATGCCCAAAAGCTTGgtaagtgcac ... tgctctgcagTTGCTGCTGTATTTAGCTTGGCTTATAAGCTTCAGCCTGCCATCATATTCA
EST: GAGAATATCAAACCTGATGAGCAAGTGGTTTGGGGATGCCCAAAAGCTTG TTGCTGCTGTATTTAG
genomic: GAGAATATCAAACCTGATGAGCAAGTGGTTTGGGGATGCCCAAAAGCTTGgtaagtgcac ... tgctctgcagTTGCTGCTGTATTTAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGCTTGCCAAAGCTATTGCCAAGGAGTCCAGAGCAGTTTTTATTAACGTGAGAATATCAAACCTGATGAGCAAGTGGTTTGGGGATGCCCAAAAGCTTGgtaagtgcacaatgtctttatggctacttttacagtacactgtaaagctatactctaccgtctacaatacactgtagtatcttcaccattgaatttttgt
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