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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CGTCCTCGCCGGAACCGGAAGTCGCCTGCGCTTCGGTCGGCTTTTCAGGAAACGAGCATTTCGCCGGCGAATTTCGTGTATCCGCTTTTCATTCACGAAGgttggtctctttgctcgtggtgcttaattagaacttaacgcttactacttatacgcattttgagtaaaacactgttctagtttcatttcattttttcact...

Basic information

species Glycine max
transcript GLYMA06G12110.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|6481889|gb|AW201160.1|AW201160
EST:     ATTTCGTGTGTCCGCTTTTCATTCACGAAG                         GTGAAGAGGATACTCCAATTGGGGCTATGCCTGGATGCTACAGGCTTGGGT
genomic: ATTTCGTGTATCCGCTTTTCATTCACGAAGgttggtctct ... gaacttacagGTGAAGAGGATACTCCAATCGGGGCTATGCCTGGATGCTACAGGCTTGGGT
EST: gi|193669590|gb|FK612316.1|FK612316
EST:     GCCGGCGAATTTCGTGTATCCGCTTTTCATTCACGAAG                         GTGAAGAGGATACTCCAATTGGGGCTATGCCTGGATGCTACAGGCTTGGGT
genomic: GCCGGCGAATTTCGTGTATCCGCTTTTCATTCACGAAGgttggtctct ... gaacttacagGTGAAGAGGATACTCCAATCGGGGCTATGCCTGGATGCTACAGGCTTGGGT