1 5' 3' | 2 5' 3' | 3 5' 3' |
ATAAACTCCGTGATAACCACGCCTTGCCACGAGGAGATCTTGCCCATCAACTCATGGACTACTCAGATGCCTTATTTCATCAGAGGCTATGCGTATTCCGgtgagttttatttccattagaaaacaggtttttatgattaaatataacaggggttttgtttattttccagtattaataacagtttgagtaaatattttca...
species | Glycine max |
transcript | GLYMA06G11430.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CTCATGGACTACTCAGATGCCTTATTTCATCAGAGGCTATGCGTATTCCG GTGGTGGGAGAAAGGTGACACGTGTTGAGGTAACCCTGGACGGAGGTGAAAEST: gi|10846695|gb|BF069531.1|BF069531
genomic: CTCATGGACTACTCAGATGCCTTATTTCATCAGAGGCTATGCGTATTCCGgtgagtttta ... gcacgtgcagGTGGTGGGAGAAAGGTGACACGTGTTGAGGTAACCCTGGACGGAGGTGAAA
EST: CTCATGGACTACTCAGATGCCTTATTTCATCAGAGGCTATGCGTATTCCG GTGGTGGGAGAA-GGTGACACGTGNTGAG--AACCCTGGACGGAGGTGAAAEST: gi|26057779|gb|CA800693.1|CA800693
genomic: CTCATGGACTACTCAGATGCCTTATTTCATCAGAGGCTATGCGTATTCCGgtgagtttta ... gcacgtgcagGTGGTGGGAGAAAGGTGACACGTGTTGAGGTAACCCTGGACGGAGGTGAAA
EST: CTCATGGACTACTCAGATGCCTTATTTCATCAGAGGCTATGCGTATTCCG GTGGTGGGAGAAAGGTGACACGTGTTGAGGTAACCCTGGACGGAGGTGAAA
genomic: CTCATGGACTACTCAGATGCCTTATTTCATCAGAGGCTATGCGTATTCCGgtgagtttta ... gcacgtgcagGTGGTGGGAGAAAGGTGACACGTGTTGAGGTAACCCTGGACGGAGGTGAAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATAAACTCCGTGATAACCACGCCTTGCCACGAGGAGATCTTGCCCATCAACTCATGGACTACTCAGATGCCTTATTTCATCAGAGGCTATGCGTATTCCGgtgagttttatttccattagaaaacaggtttttatgattaaatataacaggggttttgtttattttccagtattaataacagtttgagtaaatattttca
- - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG