1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
TGTTCTTTCAAAGAACAACTTCAACAGCATGTCCGGGTCCATGCAATGGAAGCAGTCATGGCTTGTTGGGAGATCGAGCAATCCTTACAAAGTTTAACAGgtacaacgatagtctttttagtgatttttgcatctcaacataaaaataaactaataaaggttagttgcccttccatgataaaatggaaataacttgattc...
species | Glycine max |
transcript | GLYMA06G06890.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: AGCAGTCATGGCTTGTTGGGAGATTGAGCAATCCTTACAAAGTTTAACAG GAGTTTCACCCGGGGAAGGTEST: gi|105633102|gb|DW246627.1|DW246627
genomic: AGCAGTCATGGCTTGTTGGGAGATCGAGCAATCCTTACAAAGTTTAACAGgtacaacgat ... gatttaacagGAGTTTCACCCGGGGAAGGT
EST: AGCAGTCATGGCTTGTTGGGAGATTGAGCAATCCTTACAAAGTTCAACAG GAGTTTCACCCGGGGAAGGT
genomic: AGCAGTCATGGCTTGTTGGGAGATCGAGCAATCCTTACAAAGTTTAACAGgtacaacgat ... gatttaacagGAGTTTCACCCGGGGAAGGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGTTCTTTCAAAGAACAACTTCAACAGCATGTCCGGGTCCATGCAATGGAAGCAGTCATGGCTTGTTGGGAGATCGAGCAATCCTTACAAAGTTTAACAGgtacaacgatagtctttttagtgatttttgcatctcaacataaaaataaactaataaaggttagttgcccttccatgataaaatggaaataacttgattc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaaataaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cccttcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ggaaataa