1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
CAAGAATGACCGGCGCCTTGACGATTGCTGGAGGTATTGCATTGTTGCAGGCAAGAGGGCCCTTGATGATGCCAACCTTGGACAGCAAGTCCTGGACACTgtaagtgacagaattttttgaagctgcatttgtagttgcctaactaatgaagaaaattctgattgtatcaatttaattaatttgattgtatttaaattct...
species | Glycine max |
transcript | GLYMA05G36690.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GCAAGAGGGCCCTTGATGATGCCAACCTTGGACAGCAAGTCCTGGACACT ATGGACAAAACAGGAATAGGAGTTCTGGTGGGATCAGGAATGGGAGGTATAEST: gi|213601277|gb|DB956543.1|DB956543
genomic: GCAAGAGGGCCCTTGATGATGCCAACCTTGGACAGCAAGTCCTGGACACTgtaagtgaca ... tttctagcagATGGACAAAACAAGAATAGGAGTTCTGGTGGGATCAGGAATGGGAGGTATA
EST: GCAAGAGGGCCCTTGATGATGCCAACCTTGGACAGCAAGTCCTGGACACT ATGGACAAAACAAGAATAGGAGTTCTGGTGGGATCAGGAATGGGAGGTATA
genomic: GCAAGAGGGCCCTTGATGATGCCAACCTTGGACAGCAAGTCCTGGACACTgtaagtgaca ... tttctagcagATGGACAAAACAAGAATAGGAGTTCTGGTGGGATCAGGAATGGGAGGTATA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAAGAATGACCGGCGCCTTGACGATTGCTGGAGGTATTGCATTGTTGCAGGCAAGAGGGCCCTTGATGATGCCAACCTTGGACAGCAAGTCCTGGACACTgtaagtgacagaattttttgaagctgcatttgtagttgcctaactaatgaagaaaattctgattgtatcaatttaattaatttgattgtatttaaattct
- - - - - - - - - - - - - - - - - - - - - - - - - GCAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gaagaaaa