1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
TCACCGACAGTGAGAGACTAATTGGAGAGGCTGCCAAGAATCTGGCAGCTGTCAATCCAGAAAGGACCATCTTTGATGTCAAGAGACTTATTGGAAGAAAgtaagacttactcaagttgttgatttttgacaatttgatttgatgggatcaatggtgactgacatgtatccttttgcag
species | Glycine max |
transcript | GLYMA05G36600.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GTCAATCCAGAAAGGACCATCTTTGATGTCAAGAGACTTATTGGAAGAAA GTTTGAAGATAAGGAAGTTCAAAGAGATATGAAGCTTGTTCCTTATAAGATEST: gi|151402800|gb|EV272613.1|EV272613
genomic: GTCAATCCAGAAAGGACCATCTTTGATGTCAAGAGACTTATTGGAAGAAAgtaagactta ... ccttttgcagGTTTGAAGATAAGGAAGTTCAAAGAGATATGAAGCTTGTTCCTTATAAGAT
EST: GTCAATCCAGAAAGGACCATCTTTGATGTCAAGAGACTTATTGGAAGAAA GTTTGAAGATAAGGAAGTTCAAAGAGATATGAAGCTTGTTCCTTATAAGAT
genomic: GTCAATCCAGAAAGGACCATCTTTGATGTCAAGAGACTTATTGGAAGAAAgtaagactta ... ccttttgcagGTTTGAAGATAAGGAAGTTCAAAGAGATATGAAGCTTGTTCCTTATAAGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCACCGACAGTGAGAGACTAATTGGAGAGGCTGCCAAGAATCTGGCAGCTGTCAATCCAGAAAGGACCATCTTTGATGTCAAGAGACTTATTGGAAGAAAgtaagacttactcaagttgttgatttttgacaatttgatttgatgggatcaatggtgactgacatgtatccttttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA