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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTCGGGGGATTGCGTGGTCATCATGGCCATGCCTACCGGCAAGCCTGGTCCTTTGCCTGAAAAGTCCATCACGTTATCATCTCTAATGGCTCCTAGACTGgtaattttacttgattcatggatattttgttgtaactatgaactgaaattgttttgaaatgcttctgtatcgattttgtgttaataatgttttccgtgttctaatttcgaaattgaaaattgctttttgtgctacttctggggtgtttacattacgttaaagctctttgtttaaaaaatttgctag

Basic information

species Glycine max
transcript GLYMA05G33320.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|213598156|gb|DB964159.1|DB964159
EST:     CTTTGCCTGAAAAGTCCATCACGTTATCATCTCTAATGGCTCCTAGACTG                         GCGCGTAGAGGTGGTGTAGATGAGCCGTTTGCATGGGAAAGTAGAGAGTTT
genomic: CTTTGCCTGAAAAGTCCATCACGTTATCATCTCTAATGGCTCCTAGACTGgtaattttac ... aatttgctagGCGCGTAGAGGTGGTGTAGATGAGCCGTTTGCATGGGAAAGTAGAGAGTTT
EST: gi|209711431|gb|BW665183.1|BW665183
EST:     CTTTGCCTGAAAAGTCCATCACGTTATCATCTCTAATGGCTCCTAGACTG                         GCGCGTAGAGGTGGTGTAGATGAGCCGTTTGCATGGGAAAGTAGAGAGTTT
genomic: CTTTGCCTGAAAAGTCCATCACGTTATCATCTCTAATGGCTCCTAGACTGgtaattttac ... aatttgctagGCGCGTAGAGGTGGTGTAGATGAGCCGTTTGCATGGGAAAGTAGAGAGTTT