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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATGCACATTTGGAAAATGCTACTAGCAATGTGTCCAAGTGGAGAAAAGGAAAGCTTCTAGGACGGGGAACATTTGGGCATGTATATCTGGGATTCAATAGgtaactattatctaacaaactatgaagtgctgttaaaatctattcctttgactttcaaatcaacagttatagttctgcactgtatcctgcaaagtgcatt...

Basic information

species Glycine max
transcript GLYMA05G32510.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|254325845|gb|GR838726.1|GR838726
EST:     AAGCTTCTAGGACGGGGAACATTTGGGCATGTATATCTGGGATTCAATAG                         TGAAAATGGACAAATGTGTGCAATAAAAGAGGTCAAGGTTGTCTCTGATGA
genomic: AAGCTTCTAGGACGGGGAACATTTGGGCATGTATATCTGGGATTCAATAGgtaactatta ... tgtttgacagTGAAAATGGACAAATGTGTGCAATAAAAGAGGTCAAGGTTGTCTCTGATGA
EST: gi|14205575|gb|BG839253.1|BG839253
EST:     AAGCTTCTAGGACGGGGAACATTTGGGCATGTATATCTGGGATTCA-TAG                         TGAAAATGGACAAATGTGTGCAATAAAAGAGGTCAAGGTTGTCTCTGATGA
genomic: AAGCTTCTAGGACGGGGAACATTTGGGCATGTATATCTGGGATTCAATAGgtaactatta ... tgtttgacagTGAAAATGGACAAATGTGTGCAATAAAAGAGGTCAAGGTTGTCTCTGATGA
EST: gi|22521983|gb|BU080794.1|BU080794
EST:     AAGCTTCTAGGACGGGGAACATTTGGGCATGTATATCTGGGATTCAATAG                         TGAAAATGGACAAATGTGTGCAATAAAAGAGGTCAAGGTTGTCTCTGATGA
genomic: AAGCTTCTAGGACGGGGAACATTTGGGCATGTATATCTGGGATTCAATAGgtaactatta ... tgtttgacagTGAAAATGGACAAATGTGTGCAATAAAAGAGGTCAAGGTTGTCTCTGATGA
EST: gi|208248814|gb|GE046313.1|GE046313
EST:     AAGCTTCTAGGACGGGGAACATTTGGGCATGTATATCTGGGATTCAATAG                         TGAAAATGGACAAATGTGTGCAATAAAAGAGGTCAAGGTTGTCTCTGATGA
genomic: AAGCTTCTAGGACGGGGAACATTTGGGCATGTATATCTGGGATTCAATAGgtaactatta ... tgtttgacagTGAAAATGGACAAATGTGTGCAATAAAAGAGGTCAAGGTTGTCTCTGATGA
EST: gi|16348767|gb|BI974362.1|BI974362
EST:     AAGCTTCTAGGACGGGGAACATTTGGGCATGTATATCTGGGATTCAATAG                         TGAAAATGGACAAATGTGTGCA
genomic: AAGCTTCTAGGACGGGGAACATTTGGGCATGTATATCTGGGATTCAATAGgtaactatta ... tgtttgacagTGAAAATGGACAAATGTGTGCA