1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GATCCTCGACGATTTGGAGCTTCCCAAGGATGAGGCTGTTGACATCAAAGATATGGAAGTCAACAAGCAGAAATTGAATAGACGCATTCATCAATTCAATgttcgagttgttgttcttttttcgcattttcattttgtttctttctattgtaacaaacaatacctatctacataatgtcctacag
species | Glycine max |
transcript | GLYMA05G30160.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: ATATGGAAGTCAACAAGCAGAAATTGAATAGACGCATTCATCAATTCAAT ATTGAGCTTCAAAATCCGTGTCGCCAAGGGAAGAAATTGCTTGTTCTGGATEST: gi|193631354|gb|FK583731.1|FK583731
genomic: ATATGGAAGTCAACAAGCAGAAATTGAATAGACGCATTCATCAATTCAATgttcgagttg ... tgtcctacagATTGAGCTTCAAAATCCGTGTCGCCAAGGGAAGAAATTGCTTGTTCTGGAT
EST: AGCAGAAATTGAATAGACGCATTCATCAATTCAAT ATTGAGCTTCAAAATCCGTGTCGCCAAGGGAAGAAATTGCTTGTTCTGGATEST: gi|151393341|gb|EV263216.1|EV263216
genomic: AGCAGAAATTGAATAGACGCATTCATCAATTCAATgttcgagttg ... tgtcctacagATTGAGCTTCAAAATCCGTGTCGCCAAGGGAAGAAATTGCTTGTTCTGGAT
EST: ATATGGAAGTCAACAAGCAGAAATTGAATAGACGCATTCATCAATTCAAT ATTGAGCTTCAAAATCCGTGTCGCCAAGGGAAGAAATTGCTTGTTCTGGAT
genomic: ATATGGAAGTCAACAAGCAGAAATTGAATAGACGCATTCATCAATTCAATgttcgagttg ... tgtcctacagATTGAGCTTCAAAATCCGTGTCGCCAAGGGAAGAAATTGCTTGTTCTGGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATCCTCGACGATTTGGAGCTTCCCAAGGATGAGGCTGTTGACATCAAAGATATGGAAGTCAACAAGCAGAAATTGAATAGACGCATTCATCAATTCAATgttcgagttgttgttcttttttcgcattttcattttgtttctttctattgtaacaaacaatacctatctacataatgtcctacag
- - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG