Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   		10  
 5'  3'   		11  
 5'  3'   		12  
 5'  3'   		13  
 5'  3'   		14  
 5'  3'   		15  
 5'  3'   		16  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTGTGGCATGCCAAGCCGTTGCCAACATCGTCAAAAGCTCTTTAGGCCCCGTTGGCCTCGACAAGgtactctctctctatacatagtcagatcttagacgaagtaagcaatgtctgatgcgattcgtttcag

Basic information

species Glycine max
transcript GLYMA05G29870.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|254334339|gb|GR844124.1|GR844124
EST:     CCGTTGCCAACATCGTCAAAAGCTCTTTAGGCCCCGTTGGCCTCGACAAG                         ATGCTCGTCGACGACATTGGCGACGTCACTATCACCAACGACGGTGCCACG
genomic: CCGTTGCCAACATCGTCAAAAGCTCTTTAGGCCCCGTTGGCCTCGACAAGgtactctctc ... ttcgtttcagATGCTCGTCGACGACATTGGCGACGTCACTATCACCAACGACGGTGCCACG
EST: gi|213606653|gb|DB959065.1|DB959065
EST:     CCGTTGCCAACATCGTCAAAAGCTCTTTAGGCCCCGTTGGCCTCGACAAG                         ATGCTCGTCGACGACATTGGCGACGTCACTATCACCAACGACGGTGCCACG
genomic: CCGTTGCCAACATCGTCAAAAGCTCTTTAGGCCCCGTTGGCCTCGACAAGgtactctctc ... ttcgtttcagATGCTCGTCGACGACATTGGCGACGTCACTATCACCAACGACGGTGCCACG
EST: gi|16278540|gb|BI942958.1|BI942958
EST:     CCGGTGCCAACATCGTCAAAAGCTCTTTAGGCCCCGTTGGCCTCGACAAG                         ATGCTCGTCGACGACATTGGCGACATCACTATCACCAACGACGGTGCCACG
genomic: CCGTTGCCAACATCGTCAAAAGCTCTTTAGGCCCCGTTGGCCTCGACAAGgtactctctc ... ttcgtttcagATGCTCGTCGACGACATTGGCGACGTCACTATCACCAACGACGGTGCCACG
EST: gi|16278153|gb|BI942753.1|BI942753
EST:     CCGTTGCCAACATCGTCAAAAGCTCTTTAGGCCCCGTTGGCCTCGACAAG                         ATGCTCGTCGACGACATTGGCGACGTCACTATCACCAACGACGGTGCCACG
genomic: CCGTTGCCAACATCGTCAAAAGCTCTTTAGGCCCCGTTGGCCTCGACAAGgtactctctc ... ttcgtttcagATGCTCGTCGACGACATTGGCGACGTCACTATCACCAACGACGGTGCCACG