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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AATCGAGTCACAGAGTAGAGCGAAATCGGCGTAGAGgtacgcatcataggttttttgccctaattttatttatatggttgaatgttgcagcttagggttttcttcaaaattagtttcacgtatttgatgtgaaatt...

Basic information

species Glycine max
transcript GLYMA05G28440.2
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193328661|gb|FK294793.1|FK294793
EST:     AATCGAGTCACAGAGTAGAGCGAAATCGGCGTAGAG                         ATACAAAAATGCC-AAAGTAAAGACAAATCGTGTTAAATACCCAGAGGGCT
genomic: AATCGAGTCACAGAGTAGAGCGAAATCGGCGTAGAGgtacgcatca ... ccttgaacagATACAAAAATGCCAAAAGTAAAGACAAATCGTGTTAAATACCCAGAGGGCT
EST: gi|208277997|gb|GE074920.1|GE074920
EST:     AATCGAGTCACAGAGTAGAGCGAAATCGGCGTAGAG                         ATACAAAAATGCCAAAAGTAAAGACAAATCGTGTTAAATACCCAGAGGGCT
genomic: AATCGAGTCACAGAGTAGAGCGAAATCGGCGTAGAGgtacgcatca ... ccttgaacagATACAAAAATGCCAAAAGTAAAGACAAATCGTGTTAAATACCCAGAGGGCT
EST: gi|208175602|gb|GD973399.1|GD973399
EST:     AATCGAGTCACAGAGTAGAGCGAAATCGGCGTAGAG                         ATACAAAAATGCCAAAAGTAAAGACAAATCGTGTTAAATACCCAGAGGGCT
genomic: AATCGAGTCACAGAGTAGAGCGAAATCGGCGTAGAGgtacgcatca ... ccttgaacagATACAAAAATGCCAAAAGTAAAGACAAATCGTGTTAAATACCCAGAGGGCT
EST: gi|209703736|gb|BW656869.1|BW656869
EST:     AATCGAGTCACAGAGTAGAGCGAAATCGGCGTAGAG                         ATACAAAAATGCCAAAAGTAAAGACAAATCGTGTTAAATACCCAGAGGGCT
genomic: AATCGAGTCACAGAGTAGAGCGAAATCGGCGTAGAGgtacgcatca ... ccttgaacagATACAAAAATGCCAAAAGTAAAGACAAATCGTGTTAAATACCCAGAGGGCT
EST: gi|207779118|gb|GD754148.1|GD754148
EST:     AATCGAGTCACAGAGTAGAGCGAAATCGGCGTAGAG                         ATACAAAAATGCCAAAAGTAAAGACAAATCGTGTTAAATACCCAGAGGGCT
genomic: AATCGAGTCACAGAGTAGAGCGAAATCGGCGTAGAGgtacgcatca ... ccttgaacagATACAAAAATGCCAAAAGTAAAGACAAATCGTGTTAAATACCCAGAGGGCT
EST: gi|208051273|gb|GD846776.1|GD846776
EST:     AATCGAGTCACAGAGTAGAGCGAAATCGGCGTAGAG                         ATACAAAAATGCCAAAAGTAAGGACAAGTCGTGTTAAATACCCAGAGGGCT
genomic: AATCGAGTCACAGAGTAGAGCGAAATCGGCGTAGAGgtacgcatca ... ccttgaacagATACAAAAATGCCAAAAGTAAAGACAAATCGTGTTAAATACCCAGAGGGCT