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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGTTTAGATCTTTCGAGAATTGACCGGATTATTCGGTGCTCGCTGCGATCTCAAGgtctggatgttaattagtgattacgtgtttgttaattgatcgaatcgaattcttctctttacgtgcatgtatgttgattaacgattgcgtgttttgccgcgtgtaactaaattgcgattgctttcag

Basic information

species Glycine max
transcript GLYMA05G26240.2
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151393104|gb|EV262979.1|EV262979
EST:     AGATCTTTCGAGAATTGACCGGATTATTCGGTGCTCGCTGCGATCTCAAG                         GACTGCCGGCGGCGGCCATTGAGCCTGTGCCGGAGAGCAGTGTGTCGACGG
genomic: AGATCTTTCGAGAATTGACCGGATTATTCGGTGCTCGCTGCGATCTCAAGgtctggatgt ... ttgctttcagGACTGCCGGCGGCGGCCATTGAGCCTGTGCCGGAGAGCAGTGTGTCGACGG
EST: gi|13480594|gb|BG509937.1|BG509937
EST:     GCTCGCTGCGATCTCAAG                         GACTGCCGGCGGCGGCCATTGAGCCTGTGCCGGAGAGCAGTGTGTCGACGG
genomic: GCTCGCTGCGATCTCAAGgtctggatgt ... ttgctttcagGACTGCCGGCGGCGGCCATTGAGCCTGTGCCGGAGAGCAGTGTGTCGACGG
EST: gi|213611573|gb|DB960853.1|DB960853
EST:     AGATCTTTCGAGAATTGACCGGATTATTCGGTGCTCGCTGCGATCTCAAG                         GACTGCCGGCGGCGGCCATTGAGCCTGTGCCGGAGAGCAGTGTGTCGACGG
genomic: AGATCTTTCGAGAATTGACCGGATTATTCGGTGCTCGCTGCGATCTCAAGgtctggatgt ... ttgctttcagGACTGCCGGCGGCGGCCATTGAGCCTGTGCCGGAGAGCAGTGTGTCGACGG
EST: gi|254340891|gb|GR854619.1|GR854619
EST:     AGATCTTTCGAGAATTGACCGGATTATTCGGTGCTCGCTGCGATCTCAAG                         GACTGCCGGCGGCGGCCATTGAGCCTGTGCCGGAGAGCAGTGTGTCGACGG
genomic: AGATCTTTCGAGAATTGACCGGATTATTCGGTGCTCGCTGCGATCTCAAGgtctggatgt ... ttgctttcagGACTGCCGGCGGCGGCCATTGAGCCTGTGCCGGAGAGCAGTGTGTCGACGG
EST: gi|298181983|gb|HO026158.1|HO026158
EST:     AGATCTTTCGAGAATTGATCGGATTATTCGGTGCTCGCTGCGATCTCAAG                         GACTGCCGGCGGCGGCCATTGAGCCTGTGCCGGAGAGCAGTGTGTCGACGG
genomic: AGATCTTTCGAGAATTGACCGGATTATTCGGTGCTCGCTGCGATCTCAAGgtctggatgt ... ttgctttcagGACTGCCGGCGGCGGCCATTGAGCCTGTGCCGGAGAGCAGTGTGTCGACGG
EST: gi|254346278|gb|GR859891.1|GR859891
EST:     AGATCTTTCGAGAATTGACCGGATTATTCGGTGCTCGCTGCGATCTCAAG                         GACTGCCGGCGGCGGCCATTGAGCCTGTGCCGGAGAGCAGTGTGTCGACGG
genomic: AGATCTTTCGAGAATTGACCGGATTATTCGGTGCTCGCTGCGATCTCAAGgtctggatgt ... ttgctttcagGACTGCCGGCGGCGGCCATTGAGCCTGTGCCGGAGAGCAGTGTGTCGACGG
EST: gi|213600098|gb|DB964304.1|DB964304
EST:     AGATCTTTCGAGAATTGACCGGATTATTCGGTGCTCGCTGCGATCTCAAG                         GACTGCCGGCGGCGGCCATTGAGCCTGTGCCGGAGAGCAGTGTGTCGACGG
genomic: AGATCTTTCGAGAATTGACCGGATTATTCGGTGCTCGCTGCGATCTCAAGgtctggatgt ... ttgctttcagGACTGCCGGCGGCGGCCATTGAGCCTGTGCCGGAGAGCAGTGTGTCGACGG
EST: gi|298168261|gb|HO014436.1|HO014436
EST:     AGATCTTTCGAGAATTGACCGGATTATTCGGTGCTCGCTGCGATCTCAAG                         GACTGCCGGCGGCGGCCATTGAGCCTGTGCCGGAGAGCAGTGTGTCGACGG
genomic: AGATCTTTCGAGAATTGACCGGATTATTCGGTGCTCGCTGCGATCTCAAGgtctggatgt ... ttgctttcagGACTGCCGGCGGCGGCCATTGAGCCTGTGCCGGAGAGCAGTGTGTCGACGG