1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TGAGAAGAGTTTGTATCTGGTTTTTGAGTACCTTGACTTAGATCTAAAGAAGCACATGGATTCATCTCCAGAATTTGCAAAAGATCCACGACAAGTAAAAgtgtgtgacttatcttgttttcttttctttgtagatttttgagctttttgtaactgaagttatagttataagagagagcaagaaatacagcgtagccatc...
species | Glycine max |
transcript | GLYMA05G25320.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: AGCACATGGATTCATCTCCAGAATTTGCAAAAGATCCACGACAAGTAAAA ATGTTCCTGTACCAAATTCTCTGTGGCATTGCATACTGTCATTCACATAGAEST: gi|193414159|gb|FK377859.1|FK377859
genomic: AGCACATGGATTCATCTCCAGAATTTGCAAAAGATCCACGACAAGTAAAAgtgtgtgact ... ctttctgcagATGTTCCTGTACCAAATTCTCTGTGGCATTGCATACTGTCATTCACATAGA
EST: AGCACATGGATTCATCTCCAGAATTTGCAAAAGATCCACGACAAGTAAAA ATGTTCCTGTACCAAATTCTCTGTGGCATTGCATACTGTCATTCAEST: gi|16996519|gb|BM085891.1|BM085891
genomic: AGCACATGGATTCATCTCCAGAATTTGCAAAAGATCCACGACAAGTAAAAgtgtgtgact ... ctttctgcagATGTTCCTGTACCAAATTCTCTGTGGCATTGCATACTGTCATTCA
EST: AGCACATGGATTCATCTCCAGAATTTGCAAAAGATCCACGACAAGTAAAA ATGTTCCTGTACCAAATTCTCTGTGGCATTGCATACTGTCATTCACATAGAEST: gi|254326865|gb|GR836474.1|GR836474
genomic: AGCACATGGATTCATCTCCAGAATTTGCAAAAGATCCACGACAAGTAAAAgtgtgtgact ... ctttctgcagATGTTCCTGTACCAAATTCTCTGTGGCATTGCATACTGTCATTCACATAGA
EST: AGCACATGGATTCATCTCCAGAATTTGCAAAAGATCCACGACAAGTAAAA ATGTTCCTGTACCAAATTCTCTGTGGCATTGCATACTGTCATTCACATAGA
genomic: AGCACATGGATTCATCTCCAGAATTTGCAAAAGATCCACGACAAGTAAAAgtgtgtgact ... ctttctgcagATGTTCCTGTACCAAATTCTCTGTGGCATTGCATACTGTCATTCACATAGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGAGAAGAGTTTGTATCTGGTTTTTGAGTACCTTGACTTAGATCTAAAGAAGCACATGGATTCATCTCCAGAATTTGCAAAAGATCCACGACAAGTAAAAgtgtgtgacttatcttgttttcttttctttgtagatttttgagctttttgtaactgaagttatagttataagagagagcaagaaatacagcgtagccatc
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