1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
AGCAGATATTAGAAGATGGCAGACGCTGAGGATATTCAACCCCTTGTTTGCGACAATGGAACTGGAATGGTGAAGgtacaaaatgcatactttttggtttgatgcttctcgagagaattgttttgcgttaacttttgcccttcattgaaattgcaatgtgtcttttcag
species | Glycine max |
transcript | GLYMA05G09290.3 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CTGAGGATATTCAACCCCTTGTTTGCGACAATGGAACTGGAATGGTGAAG GCAGGATTTGCAGGAGACGATGCCCCACGTGCAGTGTTTCCTAGCATTGTTEST: gi|7924324|gb|AW830350.1|AW830350
genomic: CTGAGGATATTCAACCCCTTGTTTGCGACAATGGAACTGGAATGGTGAAGgtacaaaatg ... gtcttttcagGCAGGATTTGCAGGAGACGATGCCCCACGTGCAGTGTTTCCTAGCATTGTT
EST: CTGAGGATATTCAACCCCTTGTTTGCGACAATGGAACTGGAATGGTGAAG GCAGGATTTGCAGGAGACGATGCCCCACGTGCAGTGTTTCCTAGCATTGTTEST: gi|192299157|gb|FG990443.1|FG990443
genomic: CTGAGGATATTCAACCCCTTGTTTGCGACAATGGAACTGGAATGGTGAAGgtacaaaatg ... gtcttttcagGCAGGATTTGCAGGAGACGATGCCCCACGTGCAGTGTTTCCTAGCATTGTT
EST: CTGAGGATATTCAACCCCTTGTTTGCGACAATGGAACTGGAATGGTGAAG GCAGGATTTGCAGGAGACGATGCCCCACGTGCAGTGTTTCCTAGCATTGTT
genomic: CTGAGGATATTCAACCCCTTGTTTGCGACAATGGAACTGGAATGGTGAAGgtacaaaatg ... gtcttttcagGCAGGATTTGCAGGAGACGATGCCCCACGTGCAGTGTTTCCTAGCATTGTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGCAGATATTAGAAGATGGCAGACGCTGAGGATATTCAACCCCTTGTTTGCGACAATGGAACTGGAATGGTGAAGgtacaaaatgcatactttttggtttgatgcttctcgagagaattgttttgcgttaacttttgcccttcattgaaattgcaatgtgtcttttcag
- - - - - - - - - - - - - GAGGAT