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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTGAGCTGGAGAAGCAAACATACTGTGATCTTAAAGTTCTGAATAACACAGGGAACTACGTTGCCTTTAAGgtactctattaacttgtttctggacatgcttttctgctgttgattcttagtgcaggattcatgattacatttgatttcagtgctattttgctttttgctag

Basic information

species Glycine max
transcript GLYMA05G05280.1
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA05G05280.1 (Glycine max), 5'ss of exon 2
lower sequence: AT5G47180.1 (Arabidopsis thaliana), 5'ss of exon 2
TTGAGCTGGAGAAGCAAACATACTGTGATCTTAAAGTTCTGAATAACACAGGGAACTACGTTGCCTTTAAGgtactct----attaacttgttt-ctggacatgcttt-tctgctgttgattcttagtgcaggattcatgattacatttgatttcagtgctattttgcttttt--gctag
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TTGAACTTGAGAAGCAAAGCTACTGTGATCTTAAAGTTGCCAATAAAACAGAGAACTATGTTGCTTTCAAGgtaatttctgcatcaaaccaccaacttcatatgctttgtcttgtgatcaag-ttatttcgtttgttacaatggcttctttcttttgtgtt-tttggcttcatcaatcag