1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
TTTGTTAAGCCAGTTGCTCGAAATGGTTCTCCCCCTTGGCGAGATGATGACAAAGATGGGCATTACATGTTTACGCTTGGAGAAAATTTAACTTCTCGCTgtaattacacttttaccatcattaagaaatttacattcatatatttcatcatggtcaaatcctagttgatatttgtagagctgtaatcattggcatgcaa...
species | Glycine max |
transcript | GLYMA05G02740.3 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CAAAGATGGGCATTACATGTTTACGCTTGGAGAAAATTTAACTTCTCGCT ATAAGATCCATAEST: gi|151394814|gb|EV264685.1|EV264685
genomic: CAAAGATGGGCATTACATGTTTACGCTTGGAGAAAATTTAACTTCTCGCTgtaattacac ... atgtttgcagATAAGATCCATA
EST: CAAAGATGGGCATTACATGTTTACGCTTGGAGAAAATTTAACTTCTCGCT ATAAGATCCATACCAAAATGGGTGAAGGAACTTTTGGGCAGGTCTTAGAATEST: gi|193536287|gb|FK492719.1|FK492719
genomic: CAAAGATGGGCATTACATGTTTACGCTTGGAGAAAATTTAACTTCTCGCTgtaattacac ... atgtttgcagATAAGATCCATACCAAAATGGGTGAAGGAACTTTTGGGCAGGTCTTAGAAT
EST: CAAAGATGGGCATTACATGTTTACGCTTGGAGAAAATTTAACTTCTCGCT ATAAGATCCATACCAAAATGGGTGAAGGAACTTTTGGGCAGGTCTTAGAATEST: gi|208068130|gb|GD863670.1|GD863670
genomic: CAAAGATGGGCATTACATGTTTACGCTTGGAGAAAATTTAACTTCTCGCTgtaattacac ... atgtttgcagATAAGATCCATACCAAAATGGGTGAAGGAACTTTTGGGCAGGTCTTAGAAT
EST: CAAAGATGGGCATTACATGTTTACGCTTGGAGAAAATTTAACTTCTCGCT ATAAGATCCATACCAAAATGGGTGAAGGAACTTTTGGGCAGGTCTTAGAATEST: gi|208271891|gb|GE069163.1|GE069163
genomic: CAAAGATGGGCATTACATGTTTACGCTTGGAGAAAATTTAACTTCTCGCTgtaattacac ... atgtttgcagATAAGATCCATACCAAAATGGGTGAAGGAACTTTTGGGCAGGTCTTAGAAT
EST: CAAAGATGGGCATTACATGTTTACGCTTGGAGAAAATTTAACTTCTCGCT ATAAGATCCATACCAAAATGGGTGAAGGAACTTTTGGGCA
genomic: CAAAGATGGGCATTACATGTTTACGCTTGGAGAAAATTTAACTTCTCGCTgtaattacac ... atgtttgcagATAAGATCCATACCAAAATGGGTGAAGGAACTTTTGGGCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTTGTTAAGCCAGTTGCTCGAAATGGTTCTCCCCCTTGGCGAGATGATGACAAAGATGGGCATTACATGTTTACGCTTGGAGAAAATTTAACTTCTCGCTgtaattacacttttaccatcattaagaaatttacattcatatatttcatcatggtcaaatcctagttgatatttgtagagctgtaatcattggcatgcaa
- - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA