1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
CCGTAAAAATTGTCCGTGGTATAAAGAAGTATCGAGAAGCAGCCATGATAGAAATTGAGGTGTTGCAACAGCTTGGTAAACATGATAAAGGAGGCAATCGgtaagtagatttaacttaaatttgtcacgtatgctagtacatactacaatgaaaatccttgattccattgcattggttaaatgggcttattccttgcag
species | Glycine max |
transcript | GLYMA05G02740.2 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GAAATTGAGGTGTTGCAACAGCTTGGTAAACATGATAAAGGAGGCAATCG TTGTGTGCAAATACGGAACTGGTTTGACTATCGTAATCATATCTGTATTEST: gi|193364589|gb|FK329290.1|FK329290
genomic: GAAATTGAGGTGTTGCAACAGCTTGGTAAACATGATAAAGGAGGCAATCGgtaagtagat ... ttccttgcagTTGTGTGCAAATACGGAACTGGTTTGACTATCGTAATCATATCTGTATT
EST: GAAATTGAGGTGTTGCAACAGCTTGGTAAACATGATAAAGGAGGCAATCG TTGTGTGCAAATACGGAACTGGTTTGACTATCGTAATCEST: gi|193475996|gb|FK441293.1|FK441293
genomic: GAAATTGAGGTGTTGCAACAGCTTGGTAAACATGATAAAGGAGGCAATCGgtaagtagat ... ttccttgcagTTGTGTGCAAATACGGAACTGGTTTGACTATCGTAATC
EST: GAAATTGAGGTGTTGCAACAGCTTGGTAAACATGATAAAGGAGGCAATCG TTGTGTGCAAATACGGAACTGGTTTGACTATCGTAATCATATCTG
genomic: GAAATTGAGGTGTTGCAACAGCTTGGTAAACATGATAAAGGAGGCAATCGgtaagtagat ... ttccttgcagTTGTGTGCAAATACGGAACTGGTTTGACTATCGTAATCATATCTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCGTAAAAATTGTCCGTGGTATAAAGAAGTATCGAGAAGCAGCCATGATAGAAATTGAGGTGTTGCAACAGCTTGGTAAACATGATAAAGGAGGCAATCGgtaagtagatttaacttaaatttgtcacgtatgctagtacatactacaatgaaaatccttgattccattgcattggttaaatgggcttattccttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG