Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|163920822|gb|EH040025.1|EH040025EST: ACCGACTCGAGGGAAAATTCTCTGCTCACAACCTCCCAAAAACTGCAAAG AACGAGTGGGTGATTTGCAGGGTGTTTCAGAAGAGTTCAGCTGGGAAGAAA
genomic: ACCGACTCGAGGGAAAATTCTCTGCTCACAACCTCCCAAAAACTGCAAAGgtatattatt ... tttgtggcagAACGAGTGGGTGATTTGCAGGGTGTTTCAGAAGAGTTCAGCTGGGAAGAAA
EST:
gi|193628239|gb|FK576769.1|FK576769EST: ACCGACTCGAGGGAAAATTCTCTGCTCACAACCTCCCAAAAACTGCAAAG AACGAGTGGGTGATTTGCAGGGTGTTTCAGAAGAGTTCAGCTGGGAAGAAA
genomic: ACCGACTCGAGGGAAAATTCTCTGCTCACAACCTCCCAAAAACTGCAAAGgtatattatt ... tttgtggcagAACGAGTGGGTGATTTGCAGGGTGTTTCAGAAGAGTTCAGCTGGGAAGAAA
EST:
gi|38193410|gb|CF922616.1|CF922616EST: ACCGACTCGAGGGGAAATTCTCTGTTCACAACCTCCCAAAAACTGCAAAG AACGAGTGGGTGATTTGCAGGGTGTTTCAGAAGAGTTCAGCTGGGAAGAAA
genomic: ACCGACTCGAGGGAAAATTCTCTGCTCACAACCTCCCAAAAACTGCAAAGgtatattatt ... tttgtggcagAACGAGTGGGTGATTTGCAGGGTGTTTCAGAAGAGTTCAGCTGGGAAGAAA
EST:
gi|193383815|gb|FK349204.1|FK349204EST: GGGAAAATTCTCTGCTCACAACCTCCCAAAAACTGCAAAG AACGAGTGGGTGATTTGCAGGGTGTTTCAGAAGAGTTCAGCTGGGAAGAAA
genomic: GGGAAAATTCTCTGCTCACAACCTCCCAAAAACTGCAAAGgtatattatt ... tttgtggcagAACGAGTGGGTGATTTGCAGGGTGTTTCAGAAGAGTTCAGCTGGGAAGAAA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CAGAGGTCGAGCACCCAAAGGAGAGAAAAGCAATTGGGTCATGCACGAGTACCGACTCGAGGGAAAATTCTCTGCTCACAACCTCCCAAAAACTGCAAAGgtatattattattctcttccttatcttgcttttcaacttggatttgttttgatgattatgattgttgtttttgtggcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG