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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CGGATATGCGCTCTCAGGTGCTCTCCGGGGCTATTCAAAACCTAGGTCTTATTCGCGTCCTTGATTACACTGTCAACGATATCCCCAATAAATCGGACAAgtaagttacaatttcgctgcccatgtcgcttcgtattcccgcttttgaagctcatttgtgttgtttgatttatttttttcgatgcag

Basic information

species Glycine max
transcript GLYMA05G00370.2
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|16348389|gb|BI973984.1|BI973984
EST:     ATTCGCGTCCTTGATTACACTGTCAACGATATCCCCAATAAATCGGACAA                         ATACCTTCTTGCCATTAAATGTGAAGCTGTATCTCCCGCGCTTGAAATGGA
genomic: ATTCGCGTCCTTGATTACACTGTCAACGATATCCCCAATAAATCGGACAAgtaagttaca ... ttcgatgcagATACCTTCTTGCCATTAAATGTGAAGCTGTATCTCCCGCGCTTGAAATGGA
EST: gi|209698296|gb|BW667574.1|BW667574
EST:     ATTCGCGTCCTTGATTACACTGTCAACGATATCCCCAATAAATCGGACAA                         ATACCTTCTTGCCATTAAATGTGAAGCTGTATCTCCCGCGCTTGAAATGGA
genomic: ATTCGCGTCCTTGATTACACTGTCAACGATATCCCCAATAAATCGGACAAgtaagttaca ... ttcgatgcagATACCTTCTTGCCATTAAATGTGAAGCTGTATCTCCCGCGCTTGAAATGGA