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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AATGCTTACAAATAGAGACATCTATGACATAGCAGCCCTTTGTTCGGGGAATGAAAGgttgttcattgtcctctagagtgcttgatcttatacctttgtggacagcacatgatgttcttaacttttgtcag

Basic information

species Glycine max
transcript GLYMA04G40270.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192298505|gb|FG988491.1|FG988491
EST:     ACAAATAGAGACATCTATGACATAGCAGCCCTTTGTTCGGGGAATGAAAG                         GTTATTTTTTGAGGCGTGTGGATTTGGCAATGACATTTTGGGCTCTACTAC
genomic: ACAAATAGAGACATCTATGACATAGCAGCCCTTTGTTCGGGGAATGAAAGgttgttcatt ... cttttgtcagGTTATTTTTTGAGGCGTGTGGATTTGGCAATGACATTTTGGGCTCTACTAC
EST: gi|192295340|gb|FG985994.1|FG985994
EST:     ACAAATAGAGACATCTATGACATAGCAGCCCTTTGTTCGGGGAATGAAAG                         GTTATTTTTTGAGGCGTGTGGATTTGGCAATGACATTTTGGGCTCTACTAC
genomic: ACAAATAGAGACATCTATGACATAGCAGCCCTTTGTTCGGGGAATGAAAGgttgttcatt ... cttttgtcagGTTATTTTTTGAGGCGTGTGGATTTGGCAATGACATTTTGGGCTCTACTAC