1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
GGTGTTCATGACATGCTGTTAAGATTTCGATTGCTATTGTAACATGATGACATTTTTTACTTTGGCCTGAGGTCAATTTACTGGAAGgtgatttgatttttgttacaaattatgcagtctgattcatatgaaactcaaattttggctttaaacttgcttaaacactagctattaactaaaactatgt...
species | Glycine max |
transcript | GLYMA04G38320.2 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TGTAACATGATGACATTTTTTACTTTGGCCTGAGGTCAATTTACTGGAAG ATCGTTATCTAGAAGAAGATGGCAGCTGAGCTAGTCAACGGTGCAACAAGTEST: gi|209717469|gb|BW653937.1|BW653937
genomic: TGTAACATGATGACATTTTTTACTTTGGCCTGAGGTCAATTTACTGGAAGgtgatttgat ... taatttttagATCGTTATCTAGAAGAAGATGGCAGCTGAGCTAGTCAACGGTGCAACAAGT
EST: TGTAACATGATGACATTTTTTACTTTGGCCTGAGGTCAATTTACTGGAAG ATCGTTATCTAGAAGAAGATGGCAGCTGAGCTAGTCAACGGTGCAACAAGTEST: gi|208172018|gb|GD968439.1|GD968439
genomic: TGTAACATGATGACATTTTTTACTTTGGCCTGAGGTCAATTTACTGGAAGgtgatttgat ... taatttttagATCGTTATCTAGAAGAAGATGGCAGCTGAGCTAGTCAACGGTGCAACAAGT
EST: TG-AACATGATGACATTTTTTACTT-GGCCTGAGGTCAATTTACTGGAAG ATCGTTATCTAGAAGAAGATGGCAG
genomic: TGTAACATGATGACATTTTTTACTTTGGCCTGAGGTCAATTTACTGGAAGgtgatttgat ... taatttttagATCGTTATCTAGAAGAAGATGGCAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGTGTTCATGACATGCTGTTAAGATTTCGATTGCTATTGTAACATGATGACATTTTTTACTTTGGCCTGAGGTCAATTTACTGGAAGgtgatttgatttttgttacaaattatgcagtctgattcatatgaaactcaaattttggctttaaacttgcttaaacactagctattaactaaaactatgt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG