Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|6719806|gb|AW307453.1|AW307453EST: GGGCAACATATTATTGAAGTCAAGCCTCAG GGCATTACTAAAGGGTCAGTTGCACAGGAAGTTCTTTCTTCCCTAACCAAG
genomic: GGGCAACATATTATTGAAGTCAAGCCTCAGgtatatactt ... aaccgtacagGGCATTACTAAAGGGTCAGTTGCACAGGAAGTTCTTTCTTCCCTAACCAAG
EST:
gi|15287895|gb|BI471786.1|BI471786EST: AGCCTGTTGTTGTNNNNNNNGGGCAACATATTATTGAAGTCAAGCCTCAG GGCATTACTAAAGGGTCAGTTGCACAGGAAGTTCTTTCTTCCCTAACCAAG
genomic: AGCCTGTTGTTGTAAAAAAAGGGCAACATATTATTGAAGTCAAGCCTCAGgtatatactt ... aaccgtacagGGCATTACTAAAGGGTCAGTTGCACAGGAAGTTCTTTCTTCCCTAACCAAG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TTGGCAAGCCATGGAGCTGCTGGATCACCTTGAAAATGTACTTGCAAATGAGCCTGTTGTTGTAAAAAAAGGGCAACATATTATTGAAGTCAAGCCTCAGgtatatacttatctcttcacatcacaacctataatcgttctcagaagctaatattaactaatcaaccgtacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG