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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GATTCAGAATTTTAGGTGACAGATCTCTGCTCGGACTTCCATAAATGCATATCTGTGGATATGTTCCACCTTGGTTCTGTCAGATTCTCGCTTGCATGGGgtaacttatttgttctctctctccttgtttcattggtcccagaaaagaaaaattataaaagattgaatttttcacatcaatatacttgtatgttcttccc...

Basic information

species Glycine max
transcript GLYMA04G07120.2
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298186285|gb|HO036918.1|HO036918
EST:     ATCTGTGGATATGTTCCACCTTGGTTCTGTCAGATTCTCGCTTGCATGGG                         AGGTTGTCTGGGATGCTTCCCAAATCCAAAAGGCCATGCAACAAATAAAGA
genomic: ATCTGTGGATATGTTCCACCTTGGTTCTGTCAGATTCTCGCTTGCATGGGgtaacttatt ... aacagagcagAGGTTGTCTGGGATGCTTCCCAAATCCAAAAGGCCATGCAACAAATAAAGA
EST: gi|151409723|gb|EV279531.1|EV279531
EST:     ATCTGTGGATATGTTCCACCTTGGTTCTGTCAGATTCTCGCTTGCATGGGAGCAG                     
genomic: ATCTGTGGATATGTTCCACCTTGGTTCTGTCAGATTCTCGCTTGCAT--G-G--Ggtaacttatt ... aacaga
EST: gi|298185514|gb|HO030727.1|HO030727
EST:     ATCTGTGGATATGTTCCACCTTGGTTCTGTCAGATTCTCGCTTGCATGGG                         AGGTTGTCTGGGATGCTTCCCAAATCCAAAAGGCCATGCAACAAATAAAGA
genomic: ATCTGTGGATATGTTCCACCTTGGTTCTGTCAGATTCTCGCTTGCATGGGgtaacttatt ... aacagagcagAGGTTGTCTGGGATGCTTCCCAAATCCAAAAGGCCATGCAACAAATAAAGA