1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TTATTCACTTCCCTATTGTGCCCCATCAAAAATACAGGATAGTGCAGAAAATCTTGGGGAAGTACTTCGTGGTGACCGTATTGAAAATTCTCTCTATGTGgtcagtcttacttgttgtctcttatcagtttaatttttgtgacaatgacaagaaaggaattctagatgatatattttcagtttaggaacaattaactgct...
species | Glycine max |
transcript | GLYMA04G06420.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: ATCTTGGGGAAGTACTTCGTGGTGACCGTATTGAAAATTCTCTCTATGTG TTTAAAATGCGTGAGCCACAAATGTGCAATATTGTGTGTAATCTTAAACTTEST: gi|213610853|gb|DB963183.1|DB963183
genomic: ATCTTGGGGAAGTACTTCGTGGTGACCGTATTGAAAATTCTCTCTATGTGgtcagtctta ... tattttgcagTTTAAAATGCGTGAGCCACAAATGTGCAATATTCTGTGTAATCTTAAACTT
EST: ATCTTGGGGAAGTACTTCGTGGTGACCGTATTGAAAATTCTCTCTATGTG TTTAAAATGCGTGAGCCACAAATGTGCAATATTCTGTGTAATCTTAAACTTEST: gi|213608468|gb|DB972684.1|DB972684
genomic: ATCTTGGGGAAGTACTTCGTGGTGACCGTATTGAAAATTCTCTCTATGTGgtcagtctta ... tattttgcagTTTAAAATGCGTGAGCCACAAATGTGCAATATTCTGTGTAATCTTAAACTT
EST: ATCTTGGGGAAGTACTTCGTGGTGACCGTATTGAAAATTCTCTCTATGTG TTTAAAATGCGTGAGCCACAAATGTGCAATATTCTGTGTAATCTTAAACTTEST: gi|209727150|gb|BW655215.1|BW655215
genomic: ATCTTGGGGAAGTACTTCGTGGTGACCGTATTGAAAATTCTCTCTATGTGgtcagtctta ... tattttgcagTTTAAAATGCGTGAGCCACAAATGTGCAATATTCTGTGTAATCTTAAACTT
EST: ATCTTGGGGAAGTACTTCGTGGTGACCGTATTGAAAATTCTCTCTATGTG TTTAAAATGCGTGAGCCACAAATGTGCAATATTCTGTGTAATCTTAAACTTEST: gi|208193654|gb|GD992987.1|GD992987
genomic: ATCTTGGGGAAGTACTTCGTGGTGACCGTATTGAAAATTCTCTCTATGTGgtcagtctta ... tattttgcagTTTAAAATGCGTGAGCCACAAATGTGCAATATTCTGTGTAATCTTAAACTT
EST: AAGTACTTCGTGGTGACCGTATTGAAAATTCTCTCTATGTG TTTAAAATGCGTGAGCCACAAATGTGCAATATTCTGTGTAATCTTAAACTT
genomic: AAGTACTTCGTGGTGACCGTATTGAAAATTCTCTCTATGTGgtcagtctta ... tattttgcagTTTAAAATGCGTGAGCCACAAATGTGCAATATTCTGTGTAATCTTAAACTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTATTCACTTCCCTATTGTGCCCCATCAAAAATACAGGATAGTGCAGAAAATCTTGGGGAAGTACTTCGTGGTGACCGTATTGAAAATTCTCTCTATGTGgtcagtcttacttgttgtctcttatcagtttaatttttgtgacaatgacaagaaaggaattctagatgatatattttcagtttaggaacaattaactgct
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