1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
TCAAAGAAAGAGTTCAATAAAACAGAAGATGATTTGAAATCTCTTCAAAGTGTTGGGCAGATTATTGGCGAAGTTCTCAGGCCTCTTGACAATGAACGCCgtaattattctgtccttttattttgatatttgaatctcattgttcaacttcactcttctttaattgtgttgccaacctaacgttttataaatactgagtc...
species | Glycine max |
transcript | GLYMA04G03180.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TGTTGGGCAGATTATTGGCGAAGTTCTCAGGCCTCTTGACAATGAACGCC TGATTGTTAAAGCAAGCAGTGGTCCCAGGTATGTGGTTGGTTGCCGCAGTAEST: gi|7285516|gb|AW598003.1|AW598003
genomic: TGTTGGGCAGATTATTGGCGAAGTTCTCAGGCCTCTTGACAATGAACGCCgtaattattc ... gttttctcagTGATTGTTAAAGCAAGCAGTGGTCCCAGGTATGTGGTTGGTTGCCGCAGTA
EST: TGTTGGGCAGATTATTGGCGAAGTTCTCAGGCCTCTTGACAATGAACGCC TGATTGTTAAAGCAAGCAGTGGTCCCAGGTATGTGGTTGGTTGCCGCAGTAEST: gi|254341452|gb|GR850665.1|GR850665
genomic: TGTTGGGCAGATTATTGGCGAAGTTCTCAGGCCTCTTGACAATGAACGCCgtaattattc ... gttttctcagTGATTGTTAAAGCAAGCAGTGGTCCCAGGTATGTGGTTGGTTGCCGCAGTA
EST: TGTTGGGCAGATTATTGGCGAAGTTCTCAGGCCTCTTGACAATGAACGCC TGATTGTTAAAGCAAGCAGTGGTCCCAGGTATGTGGTTGGTTGCCGCAGTAEST: gi|208050262|gb|GD845485.1|GD845485
genomic: TGTTGGGCAGATTATTGGCGAAGTTCTCAGGCCTCTTGACAATGAACGCCgtaattattc ... gttttctcagTGATTGTTAAAGCAAGCAGTGGTCCCAGGTATGTGGTTGGTTGCCGCAGTA
EST: TGTTGGGCAGATTATTGGCGAAGTTCTCAGGCCTCTTGACAATGAACGCC TGATTGTTAAAGCAAGCAGTGGTCCCAGGTATGTGGTTGGTTGCCGCAGTA
genomic: TGTTGGGCAGATTATTGGCGAAGTTCTCAGGCCTCTTGACAATGAACGCCgtaattattc ... gttttctcagTGATTGTTAAAGCAAGCAGTGGTCCCAGGTATGTGGTTGGTTGCCGCAGTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCAAAGAAAGAGTTCAATAAAACAGAAGATGATTTGAAATCTCTTCAAAGTGTTGGGCAGATTATTGGCGAAGTTCTCAGGCCTCTTGACAATGAACGCCgtaattattctgtccttttattttgatatttgaatctcattgttcaacttcactcttctttaattgtgttgccaacctaacgttttataaatactgagtc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT