1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
CTTATACATAATTGCTACAAAGAATCGGTAGAATCATTCATTGCTTGCACGGGAGCAAAGCAGCCGACAGATTATTTGGAGGACATGGATAAAAGGAAAAgtaggtttgtggttatttttgggtatacaagattaattcaagtgttgttacctgatcatattttattttcttgcttagcctaggaagttttgtgttcact...
species | Glycine max |
transcript | GLYMA04G03080.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GGGAGCAAAGCAGCCGACAGATTATTTGGAGGACATGGATAAAAGGAAAA GAATTTTTCACTTTGCACTAGAGGGAAATGCACTCAAGGCTATTGAGCTTAEST: gi|19054068|gb|BM732735.1|BM732735
genomic: GGGAGCAAAGCAGCCGACAGATTATTTGGAGGACATGGATAAAAGGAAAAgtaggtttgt ... ttgtctctagGAATTTTTCACTTTGCACTAGAGGGAAATGCACTCAAGGCTATTGAGCTTA
EST: GGGAGCAAAGCAGCCGACAGATTATTTGGAGGGCATGGATAAAAGGAAAA GAATTTTTCACTTTGCACTAGAGGGAAATGCACTCAAGGCTATTGAGCTTAEST: gi|9566116|gb|BE475554.1|BE475554
genomic: GGGAGCAAAGCAGCCGACAGATTATTTGGAGGACATGGATAAAAGGAAAAgtaggtttgt ... ttgtctctagGAATTTTTCACTTTGCACTAGAGGGAAATGCACTCAAGGCTATTGAGCTTA
EST: GGGAGCAAAGCAGCCGACAGATTATTTGGAGGACATGGATAAAAGGAAAA GAATTTTTCACTTTGCACTAGAGGGAAATGCACTCAAGGCTATTGAGCTTAEST: gi|298168072|gb|HO013335.1|HO013335
genomic: GGGAGCAAAGCAGCCGACAGATTATTTGGAGGACATGGATAAAAGGAAAAgtaggtttgt ... ttgtctctagGAATTTTTCACTTTGCACTAGAGGGAAATGCACTCAAGGCTATTGAGCTTA
EST: GGGAGCAAAGCAGCCGACAGATTATTTGGAGGACATGGATAAAAGGAAAA GAATTTTTCACTTTGCACTAGAGGGAAATGCACTCAAGGCTATTGGGCTTAEST: gi|209723413|gb|BW679947.1|BW679947
genomic: GGGAGCAAAGCAGCCGACAGATTATTTGGAGGACATGGATAAAAGGAAAAgtaggtttgt ... ttgtctctagGAATTTTTCACTTTGCACTAGAGGGAAATGCACTCAAGGCTATTGAGCTTA
EST: GGGAGCAAAGCAGCCGACAGATTATTTGGAGGACATGGATAAAAGGAAAA GAATTTTTCACTTTGCACTAGAGGGAAATGCACTCAAGGCTATTGAGCTTAEST: gi|207730605|gb|GD707492.1|GD707492
genomic: GGGAGCAAAGCAGCCGACAGATTATTTGGAGGACATGGATAAAAGGAAAAgtaggtttgt ... ttgtctctagGAATTTTTCACTTTGCACTAGAGGGAAATGCACTCAAGGCTATTGAGCTTA
EST: GGGAGCAAAGCAGCCGACAGATTATTTGGAGGACATGGATAAAAGGAAAA GAATTTTTCACTTTGCACTAGAGGGAAATGCACTCAAGGCTATTGAGCTTAEST: gi|254325123|gb|GR834548.1|GR834548
genomic: GGGAGCAAAGCAGCCGACAGATTATTTGGAGGACATGGATAAAAGGAAAAgtaggtttgt ... ttgtctctagGAATTTTTCACTTTGCACTAGAGGGAAATGCACTCAAGGCTATTGAGCTTA
EST: GGGAGCAAAGCAGCCGACAGATTATTTGGAGGACATGGATAAAAGGAAAA GAATTTTTCACTTTGCACTAGAGGGAAATGCACTCAAGGCTATTGAGCTTA
genomic: GGGAGCAAAGCAGCCGACAGATTATTTGGAGGACATGGATAAAAGGAAAAgtaggtttgt ... ttgtctctagGAATTTTTCACTTTGCACTAGAGGGAAATGCACTCAAGGCTATTGAGCTTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTTATACATAATTGCTACAAAGAATCGGTAGAATCATTCATTGCTTGCACGGGAGCAAAGCAGCCGACAGATTATTTGGAGGACATGGATAAAAGGAAAAgtaggtttgtggttatttttgggtatacaagattaattcaagtgttgttacctgatcatattttattttcttgcttagcctaggaagttttgtgttcact
- - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA