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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTATCTTCTCTTCGAGCATCTTTCCGCTTACAAGAACCCCGAGGAGCAAAAGTTCCTCATCGGGGTTATCCTAATGGTTCCCTGCTATTCTTTTGAATCTgtaagttcgtgttctacattacattcatatgatattatttcaattctaactcactttcctctttcccccaaccccaaccag

Basic information

species Glycine max
transcript GLYMA04G00250.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298182933|gb|HO028146.1|HO028146
EST:     AGTTCCTCATCGGGGTTATCCTAATGGTTCCCTGCTATTCTTTTGAATCT                         TTTGTATCATTGGTCAATCCCTCAATCAGTGTTGATTGCGAGATTCTAAGG
genomic: AGTTCCTCATCGGGGTTATCCTAATGGTTCCCTGCTATTCTTTTGAATCTgtaagttcgt ... ccccaaccagTTTGTATCATTGGTCAATCCCTCAATCAGTGTTGATTGCGAGATTCTAAGG
EST: gi|19271179|gb|BM887435.1|BM887435
EST:     AGTTCCTCATCGGGGTTATCCTAATGGTTCCCTGCTATTCTTTTGAATCT                         TGTGTATCATTGGTCAATCCCTCAATCAGTGTTGATTGCGAGATTCTAAGG
genomic: AGTTCCTCATCGGGGTTATCCTAATGGTTCCCTGCTATTCTTTTGAATCTgtaagttcgt ... ccccaaccagTTTGTATCATTGGTCAATCCCTCAATCAGTGTTGATTGCGAGATTCTAAGG