Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|26047296|gb|CA784132.1|CA784132EST: CTTGGCAACAG GTGGTCACAGATTGCAGCTCAGTTACCAGGAAGAACTGATAATGAGATAAA
genomic: CTTGGCAACAGgtactactat ... gttgtatcagGTGGTCACAGATTGCAGCTCAGTTACCAGGAAGAACTGATAATGAGATAAA
EST:
gi|22522173|gb|BU080984.1|BU080984EST: CAGCAAGAAGAGAATTCCATTGTTGAACTTCATGCAGTCCTTGGCAACAG GTGGTCACAGATTGCAGCTCAGTTACCAGGAAGAACTGATAATGAGATAAA
genomic: CAGCAAGAAGAGAATTCCATTGTTGAACTTCATGCAGTCCTTGGCAACAGgtactactat ... gttgtatcagGTGGTCACAGATTGCAGCTCAGTTACCAGGAAGAACTGATAATGAGATAAA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TAAGGTGGATAAATTATCTCAGGCCTGATTTGAAGAGAGGAGCATTCTCACAGCAAGAAGAGAATTCCATTGTTGAACTTCATGCAGTCCTTGGCAACAGgtactactatattttgttttcaaagttgttgctagtttagttcgccttttcgtcgtttagattaattgttatcactacaagtattttcgctattacggtgtctcttgaggctgtcggtaaaacatgttctttgtttcatggttttgtatatgtgtttttgatggttgtatcag
- - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - GCAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGA