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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGATGATTTGCGAGTCCCATCTTCCCCTTATTTTCCTGCATATGCACAAGGACATGAACCACCACCAATGGTGCAGGAGCGGTTCCAGAGTgttattagatagctttttcaatatctaggccttttttttcttcctctaaggttgagtgttcaccttctatttagtctttgtctttcaactactaacaatatgttttggtatttag

Basic information

species Glycine max
transcript GLYMA03G37880.1
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA03G37880.1 (Glycine max), 5'ss of exon 2
lower sequence: AT1G02560.1 (Arabidopsis thaliana), 5'ss of exon 3
GGATGATTTGCGAGTCCCATCTTCCCCTTATTTTCCTGCATATGCACAAGGACATGAACCACCACCAATGGTGCAGGAGCGGTTCCAGAGTgttattagatagctttttcaatatctaggccttt-----tttttcttcctctaaggttgagtgtt-caccttcta-tttagtctttgtctttcaactactaacaatatgttttggtatttag-
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---------------CCCTTCTTCGCCGTATTTTCCTGCTTATGCTCAAGGACAAGGACCACCTCCTATGGTGCAAGAACGTTTCCAGAGTATCATTAGTCAGCTCTTCCAATATgtaaacttatgaaatctactctttctttaagattgattatcatagtttctagcttagtgttaat-----gaatggtttcg-tttgttttgatcttttag