Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCAGGCTTTTGCAGATGATTTGAACTCAACAAGCTCTTCACCTTGTGAATGGTTCGTATGTGATGATGACCAGACCTCTACAAGATATTTTGTGATCCAGgtagggcatacttattcgggacatgtttttattttgccatgtaaaatacatttaattgcattattgtatgaacacttgcatatgatatgatagaagcatg...

Basic information

species Glycine max
transcript GLYMA03G37660.1
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA03G37660.1 (Glycine max), 5'ss of exon 2
lower sequence: LOC_Os01g15000.1 (Oryza sativa), 5'ss of exon 2
GCAGGCTTTTGCAGATGATTTGAACTCAACAAGCTCTTCACCTTGTGAATGGTTCGTATGTGATGATGACCAGACCTCTACAAGATATTTTGTGATCCAGgtagggcatacttattcgggacatgtttttattttgccatgtaaaataca-tttaattgcattattgt-atgaacacttgcatatgatatgatagaagcatg
 || ||| ||||||||||| |||||||  |||| ||||  ||||| ||||||||| | ||||||||||| ||   |   |||||||| |||||| | |||||| | |    || | |   | || |  | |||    | |||||  | || |||   ||  | ||  | || ||   ||   | | |  ||  ||       
ACAAGCTGTTGCAGATGATCTGAACTCTTCAAGATCTTGTCCTTGCGAATGGTTCATTTGTGATGATGATCAAGGCAGCACAAGATACTTTGTGGTTCAGgtatgtc----ttctgcccaatatatcatgatt----cgtgtaattttcactttccctggttcatcttcatcaattttttattgttaattggcag-------