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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTGTTGCTTCGTAATTTGTCCGTCAAGGGAGGAGGCGGATAAGGCCGTCAATGCGTGTCACAATAAAAGGACGTTACCCGGGgttggtactttacttggtgctgctgcttttatctttattatttcttatttttattttaataaattttgtttgttcttgtgttgaatgtgatggatgcgtt...

Basic information

species Glycine max
transcript GLYMA03G36650.2
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192326562|gb|FK017279.1|FK017279
EST:     AGGCGGATAAGGCCGTCAATGCGTGTCACAATAAAAGGACGTTACCCGGG                         GCATCTAGTCCATTACAAGTGAAGTATGCAGATGGGGAGTTGGAAAGATTA
genomic: AGGCGGATAAGGCCGTCAATGCGTGTCACAATAAAAGGACGTTACCCGGGgttggtactt ... tccaattcagGCATCTAGTCCATTACAAGTGAAGTATGCAGATGGGGAGTTGGAAAGATTA
EST: gi|298175595|gb|HO018306.1|HO018306
EST:     AGGCGGATAAGGCCGTCAATGCGTGTCACAATAAAAGGACGTTACCCGGG                         GCATCTAGTCCATTACAAGTGAAGTATGCAGATGGGGAGTTGGAAAGATTA
genomic: AGGCGGATAAGGCCGTCAATGCGTGTCACAATAAAAGGACGTTACCCGGGgttggtactt ... tccaattcagGCATCTAGTCCATTACAAGTGAAGTATGCAGATGGGGAGTTGGAAAGATTA
EST: gi|298167101|gb|HO010540.1|HO010540
EST:     AGGCGGATAAGGCCGTCAATGCGTGTCACAATAAAAGGACGTTACCCGGG                         GCATCTAGTCCATTACAAGTGAAGTATGCAGATGGGGAGTTGGAAAGATTA
genomic: AGGCGGATAAGGCCGTCAATGCGTGTCACAATAAAAGGACGTTACCCGGGgttggtactt ... tccaattcagGCATCTAGTCCATTACAAGTGAAGTATGCAGATGGGGAGTTGGAAAGATTA