1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TGATAGTGAGTTTGACTTGGAAAACATTACAGAGGCTGCAAAAAGGGCTGGAAAGAAGGTCAATGTTTTACTTCGGATTAACCCTGATGTGGATCCACAGgtatgttgttgtacaagttttctacatgagtagccaagtttggactcatgcatcttgtaattcacttagaggataaaggcttttgttcatattgctaact...
species | Glycine max |
transcript | GLYMA03G33830.2 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GGATTAACCCTGATGTGGATCCACAG GTTCATCCTTATGTTGCCACTGGGAATAAGAACTCTAAATTTGGCATTAGAEST: gi|193355263|gb|FK321780.1|FK321780
genomic: GGATTAACCCTGATGTGGATCCACAGgtatgttgtt ... tcgtggttagGTTCATCCTTATGTTGCCACTGGGAATAAGAACTCTAAATTTGGCATTAGA
EST: AAGAAGGTCAAATAGTTTTACTTCGGATTAACCCTGATGTGGATCCACAG GTTCATCCTTATGTTGCCACTGGGAATAAGAACTCTAAATTTGGCATTAGAEST: gi|308098900|gb|HO760741.1|HO760741
genomic: AAGAAGGTC-AAT-GTTTTACTTCGGATTAACCCTGATGTGGATCCACAGgtatgttgtt ... tcgtggttagGTTCATCCTTATGTTGCCACTGGGAATAAGAACTCTAAATTTGGCATTAGA
EST: GAAAGAAGGTCAATGTTTTACTTCGGATTAACCCTGATGTTGATCCACAG GTTCATCCTTATGTTGCCACTGGGAATAAGAACTCTAAATTTGGCATTAGAEST: gi|192325345|gb|FK017146.1|FK017146
genomic: GAAAGAAGGTCAATGTTTTACTTCGGATTAACCCTGATGTGGATCCACAGgtatgttgtt ... tcgtggttagGTTCATCCTTATGTTGCCACTGGGAATAAGAACTCTAAATTTGGCATTAGA
EST: GAAAGAAGGTCAATGTTTTACTTCGGATTAACCCTGATGTGGATCCACAG GTTCATCCTTATGTTGCCACTGGGAATAAGAACTCTAAATTTGGCATTAGAEST: gi|14258605|gb|BG881513.1|BG881513
genomic: GAAAGAAGGTCAATGTTTTACTTCGGATTAACCCTGATGTGGATCCACAGgtatgttgtt ... tcgtggttagGTTCATCCTTATGTTGCCACTGGGAATAAGAACTCTAAATTTGGCATTAGA
EST: GAAAGAAGGTCAATGTTTTACTTCGGATTAACCCTGATGTGGATCCACAG GTTCATCCTTATGTTGCCACTGGGAATAAGAACTCTAAATTTGGCATTAGAEST: gi|192320763|gb|FK013853.1|FK013853
genomic: GAAAGAAGGTCAATGTTTTACTTCGGATTAACCCTGATGTGGATCCACAGgtatgttgtt ... tcgtggttagGTTCATCCTTATGTTGCCACTGGGAATAAGAACTCTAAATTTGGCATTAGA
EST: GAAAGAAGGTCAATGTTTTACTTCGGATTAACCCTGATGTGGATCCACAG GTTCATCCTTATGTTGCCACTGGGAATAAGAACTCTAAATTTGGCATTAGA
genomic: GAAAGAAGGTCAATGTTTTACTTCGGATTAACCCTGATGTGGATCCACAGgtatgttgtt ... tcgtggttagGTTCATCCTTATGTTGCCACTGGGAATAAGAACTCTAAATTTGGCATTAGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGATAGTGAGTTTGACTTGGAAAACATTACAGAGGCTGCAAAAAGGGCTGGAAAGAAGGTCAATGTTTTACTTCGGATTAACCCTGATGTGGATCCACAGgtatgttgttgtacaagttttctacatgagtagccaagtttggactcatgcatcttgtaattcacttagaggataaaggcttttgttcatattgctaact
- - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG