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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AAGGGTTTTGCGGTGGTTACTGTCAATGGCGACGGCGGGGTTGTATCGGCGCCTTCTTCCTTGCCCCCCCGCCGTCGAGTTTGCTTCCTCACAAGGCAAGgtatgagaatgggtgcagtaaatgttaacattttgactttgttagatagtatcatgtgtttttactcacctttttttgtttgattgaatgccag

Basic information

species Glycine max
transcript GLYMA03G32200.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|26047568|gb|CA784307.1|CA784307
EST:     GCCTTCTTCCTTGNNNNNNNGCCGTCGAGTTTGCTTCCTCACAAGGCAAG                         CAACTATTTCTTGAATCCATTCAGAATGGAACCATGGAAGGCTTCTACAAG
genomic: GCCTTCTTCCTTGCCCCCCCGCCGTCGAGTTTGCTTCCTCACAAGGCAAGgtatgagaat ... tgaatgccagCAACTATTTCTTGAATCCATTCAGAATGGAACCATGGAAGGCTTCTACAAG
EST: gi|209714258|gb|BW677011.1|BW677011
EST:     GCCTTCTTCCTTGNNNNNNNGCCGTCGAGTTTGCTTCCTCACAAGGCAAG                         CAACTATTTCTTGAATCCATTCAGAATGGAACCATGGAAGGCTTCTACAAG
genomic: GCCTTCTTCCTTGCCCCCCCGCCGTCGAGTTTGCTTCCTCACAAGGCAAGgtatgagaat ... tgaatgccagCAACTATTTCTTGAATCCATTCAGAATGGAACCATGGAAGGCTTCTACAAG