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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TAATTGTGGCTTGTGTATATTTTGCACTGTTGCGGAAATGAAGGAAAAGAAGAATACTGCCTCTACTCTCAAGCGCATTTTAGTGAATTGTTCATCTCAGgtctgattttggcttagtatgccagcaacagcgatgcacttttggttttgggtgcatgatgaaattgtgtctggaacgttttacgttacatcgttttggt...

Basic information

species Glycine max
transcript GLYMA03G30320.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|18041443|gb|BM309737.1|BM309737
EST:     AGAATACTGCCTCTACTCTCAAGCGCATTTTAGTGAATTGTTCATCTCAG                         GCAAAAGCATATGGGAGCTGTGTTGCAGCGAAGGTTCCAGATATTGAACGT
genomic: AGAATACTGCCTCTACTCTCAAGCGCATTTTAGTGAATTGTTCATCTCAGgtctgatttt ... catcaaatagGCAAAAGCATATGGGAGCTGTGTTGCAGCGAAGGTTCCAGATATTGAACGT
EST: gi|213605039|gb|DB956372.1|DB956372
EST:     AGAATACTGCCTCTACTCTCAAGCGCATTTTAGTGAATTGTTCATCTCAG                         GCAAAAGCATATGGGAGCTGTGTTGCAGCGAAGGTTCCAGATATTGAACGT
genomic: AGAATACTGCCTCTACTCTCAAGCGCATTTTAGTGAATTGTTCATCTCAGgtctgatttt ... catcaaatagGCAAAAGCATATGGGAGCTGTGTTGCAGCGAAGGTTCCAGATATTGAACGT
EST: gi|209699814|gb|BW661124.1|BW661124
EST:     AGAATACTGCCTCTACTCTCAAGCGCATTTTAGTGAATTGTTCATCTCAG                         GCAAAAGCATATGGGAGCTGTGTTGCAGCGAAGGTTCCAGATATTGAACGT
genomic: AGAATACTGCCTCTACTCTCAAGCGCATTTTAGTGAATTGTTCATCTCAGgtctgatttt ... catcaaatagGCAAAAGCATATGGGAGCTGTGTTGCAGCGAAGGTTCCAGATATTGAACGT
EST: gi|14126404|gb|BG790842.1|BG790842
EST:     AGAATACTGCCTCTACTCTCAAGCGCATTTTAGTGAATTGTTCATCTCAG                         GCAAAAGCATATGGGAGCTGTGTTGCAGCGAAGGTTCCAGATATTGAACGT
genomic: AGAATACTGCCTCTACTCTCAAGCGCATTTTAGTGAATTGTTCATCTCAGgtctgatttt ... catcaaatagGCAAAAGCATATGGGAGCTGTGTTGCAGCGAAGGTTCCAGATATTGAACGT