1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CAAACATCTTTACCTTAAACGACAACAATGGCCGATGCCGAGGATATTCAACCCCTCGTTTGCGATAATGGAACCGGAATGGTCAAGgtatatcaatttttatgggatcataggtttttctttttaacccatgttataaatgtgaaatatttacccatcttgttgatgattaatcttcgcagcaaat...
species | Glycine max |
transcript | GLYMA03G30110.2 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CCGAGGATATTCAACCGCTCGTTTGCGATAATGGAACCGGAATGGTCAAG GCTGGTTTTGCCGGAGATGATGCGCCGAGGGCGGTGTTCCCCAGCATTGTGEST: gi|193601495|gb|FK552116.1|FK552116
genomic: CCGAGGATATTCAACCCCTCGTTTGCGATAATGGAACCGGAATGGTCAAGgtatatcaat ... tgtgtgatagGCTGGTTTTGCCGGAGATGATGCGCCGAGGGCGGTGTTCCCCAGCATTGTG
EST: ATATTCAACCCCTCGTTTGCGATAATGGAACCGGAATGGTCAAG GCTGGTTTTGCCGGAGATGATGCGCCGAGGGCGGTGTTCCCCAGCATTGTGEST: gi|209701261|gb|BW652268.1|BW652268
genomic: ATATTCAACCCCTCGTTTGCGATAATGGAACCGGAATGGTCAAGgtatatcaat ... tgtgtgatagGCTGGTTTTGCCGGAGATGATGCGCCGAGGGCGGTGTTCCCCAGCATTGTG
EST: CCGAGGATATTCAACCCCTCGTTTGCGATAATGGAACCGGAATGGTCAAG GCTGGTTTTGCCGGAGATGATGCGCCGAGGGCGGTGTTCCCCAGCATTGTGEST: gi|16346204|gb|BI971799.1|BI971799
genomic: CCGAGGATATTCAACCCCTCGTTTGCGATAATGGAACCGGAATGGTCAAGgtatatcaat ... tgtgtgatagGCTGGTTTTGCCGGAGATGATGCGCCGAGGGCGGTGTTCCCCAGCATTGTG
EST: CCGAGGATATTCAACCCCTCGTTTGCGATAATGGAACCGGAATGGTCAAG GCTGGTTTTGCCGGAGATGATGCGCCGAGGGCGGTGTTCCCCAGCANTT-TEST: gi|193642633|gb|FK593331.1|FK593331
genomic: CCGAGGATATTCAACCCCTCGTTTGCGATAATGGAACCGGAATGGTCAAGgtatatcaat ... tgtgtgatagGCTGGTTTTGCCGGAGATGATGCGCCGAGGGCGGTGTTCCCCAGCA-TTGT
EST: CCGAGGATATTCAACCCCTCGTTTGCGATAATGGAACCGGAATGGTCAAG GCTGGTTTTGCCGGAGATGATGCGCCGAGGGCGGTGTTCCCCAGCATTGTGEST: gi|208197124|gb|GD999339.1|GD999339
genomic: CCGAGGATATTCAACCCCTCGTTTGCGATAATGGAACCGGAATGGTCAAGgtatatcaat ... tgtgtgatagGCTGGTTTTGCCGGAGATGATGCGCCGAGGGCGGTGTTCCCCAGCATTGTG
EST: CCGAGGATATTCAACCCCTCGTTTGCGATAATGGAACCGGAATGGTCAAG GCTGGTTTTGCCGGAGATGATGCGCCGAGGGCGGTGTTCCCCAGCATTGTGEST: gi|120530859|gb|EH258992.1|EH258992
genomic: CCGAGGATATTCAACCCCTCGTTTGCGATAATGGAACCGGAATGGTCAAGgtatatcaat ... tgtgtgatagGCTGGTTTTGCCGGAGATGATGCGCCGAGGGCGGTGTTCCCCAGCATTGTG
EST: GCGATAATGGAACCGGAATGGTCAAG GCTGGTTTTGCCGGAGATGATGCGCCGAGGGCGGTGTTCCCCAGCATTGTGEST: gi|208103976|gb|GD902651.1|GD902651
genomic: GCGATAATGGAACCGGAATGGTCAAGgtatatcaat ... tgtgtgatagGCTGGTTTTGCCGGAGATGATGCGCCGAGGGCGGTGTTCCCCAGCATTGTG
EST: CCGAGGATATTCAACCCCTCGTTTGCGATAATGGAACCGGAATGGTCAAG GCTGGTTTTGCCGGAGATGATGCGCCGAGGGCGGTGTTCCCCAGCATTGTGEST: gi|254315473|gb|GR825282.1|GR825282
genomic: CCGAGGATATTCAACCCCTCGTTTGCGATAATGGAACCGGAATGGTCAAGgtatatcaat ... tgtgtgatagGCTGGTTTTGCCGGAGATGATGCGCCGAGGGCGGTGTTCCCCAGCATTGTG
EST: CCGAGGATATTCAACCCCTCGTTTGCGATAATGGAACCGGAATGGTCAAG GCTGGTTTTGCCGGAGATGATGCGCCGAGGGCGGTGTTCCCCAGCATTGTG
genomic: CCGAGGATATTCAACCCCTCGTTTGCGATAATGGAACCGGAATGGTCAAGgtatatcaat ... tgtgtgatagGCTGGTTTTGCCGGAGATGATGCGCCGAGGGCGGTGTTCCCCAGCATTGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAAACATCTTTACCTTAAACGACAACAATGGCCGATGCCGAGGATATTCAACCCCTCGTTTGCGATAATGGAACCGGAATGGTCAAGgtatatcaatttttatgggatcataggtttttctttttaacccatgttataaatgtgaaatatttacccatcttgttgatgattaatcttcgcagcaaat
- - - - - - - - - - - - - - - - - - - GAGGAT