1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GGAGATTCGAAAGCCAGAGCAGCTTAACACAATTAGTTCCCTCATTATCCCTGGTGGAGAAAGCACCACCATGGCTAAGCTCGCCGAGTATCACAACCTGgtcgctttctttacctcttttgtttttatttttatatctattcatatttgcgtagactgaaaaatatttgccttttatcggaaaggaatatttaaagggt...
species | Glycine max |
transcript | GLYMA03G08260.2 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CTGGTGGAGAAAGCACCACCATGGCTAAGCTCGCCGAGTATCACAACCTG TTTCCTGCTTTGCGAGAGTTTGTACAAATGGGAAAGCCTGTTTGGGGAACCEST: gi|19348349|gb|BM892881.1|BM892881
genomic: CTGGTGGAGAAAGCACCACCATGGCTAAGCTCGCCGAGTATCACAACCTGgtcgctttct ... gatttttcagTTTCCTGCTTTGCGAGAGTTTGTACAAATGGGAAAGCCTGTTTGGGGAACC
EST: CTGGTGGAGAAAGCACCACCATGGCTAAGCTCGCCGAGTATCACAACCTG TTTCCTGCTTTGCGAGAGTTTGTACAAATGGGAAAGCCTGTTTGGGGAACCEST: gi|6454596|gb|AW185279.1|AW185279
genomic: CTGGTGGAGAAAGCACCACCATGGCTAAGCTCGCCGAGTATCACAACCTGgtcgctttct ... gatttttcagTTTCCTGCTTTGCGAGAGTTTGTACAAATGGGAAAGCCTGTTTGGGGAACC
EST: CTGGTGGAGAAAGCACCACCATGGCTAAGCTCGCCGAGTATCACAACCTG TTTCCTGCTTTGCGAGAGTTTGTACAAATGGGAAAGCCTGTTTGGGGAACCEST: gi|209706787|gb|BW678156.1|BW678156
genomic: CTGGTGGAGAAAGCACCACCATGGCTAAGCTCGCCGAGTATCACAACCTGgtcgctttct ... gatttttcagTTTCCTGCTTTGCGAGAGTTTGTACAAATGGGAAAGCCTGTTTGGGGAACC
EST: CTGGTGGAGAAAGCACCACCATGGCTAAGCTCGCCGAGTATCACAACCTG TTTCCTGCTTTGCGAGAGTTTGTACAAATGGGAAAGCCTGTTTGGGGGACC
genomic: CTGGTGGAGAAAGCACCACCATGGCTAAGCTCGCCGAGTATCACAACCTGgtcgctttct ... gatttttcagTTTCCTGCTTTGCGAGAGTTTGTACAAATGGGAAAGCCTGTTTGGGGAACC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGAGATTCGAAAGCCAGAGCAGCTTAACACAATTAGTTCCCTCATTATCCCTGGTGGAGAAAGCACCACCATGGCTAAGCTCGCCGAGTATCACAACCTGgtcgctttctttacctcttttgtttttatttttatatctattcatatttgcgtagactgaaaaatatttgccttttatcggaaaggaatatttaaagggt
- - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA