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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AAACAAAGTGGTATTGGCCTTATTGGAATTGGCAACACCGTGAGCATTGACTTCTGCACTTCCTGCTCTTACAAgtttgttcaattccttgctttttttcaattccgatctaattgtttgatttaagttgcggttgttgggttcttattcaatatatatatgtgcctagttgga...

Basic information

species Glycine max
transcript GLYMA03G07550.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192312787|gb|FK005413.1|FK005413
EST:     GGAATTGGCAACACCGTGAGCATTGACTTCTGCACTTCCTGCTCTTACAA                         GGGAAATGCAGTAACAGTTAAAAACATGCTGGAATCTGAATTTCCTGGGAT
genomic: GGAATTGGCAACACCGTGAGCATTGACTTCTGCACTTCCTGCTCTTACAAgtttgttcaa ... ttttctgcagGGGAAATGCAGTAACAGTTAAAAACATGCTGGAATCTGAATTTCCTGGGAT
EST: gi|192315735|gb|FK011203.1|FK011203
EST:     GCACTTCCTGCTCTTACAA                         GGGAAATGCAGTAACAGTTAAAAACATGCTGGAATCTGAATTTCCTGGGAT
genomic: GCACTTCCTGCTCTTACAAgtttgttcaa ... ttttctgcagGGGAAATGCAGTAACAGTTAAAAACATGCTGGAATCTGAATTTCCTGGGAT
EST: gi|6719567|gb|AW307214.1|AW307214
EST:     GGAATTGGCAACACCGTGAGCATTGACTTCTGCACTTCCTGCTCTTACAA                         GGGAAATGCAGTAACAGTTAAAAACATGCTGGAATCTGAATTTCCTGGGAT
genomic: GGAATTGGCAACACCGTGAGCATTGACTTCTGCACTTCCTGCTCTTACAAgtttgttcaa ... ttttctgcagGGGAAATGCAGTAACAGTTAAAAACATGCTGGAATCTGAATTTCCTGGGAT
EST: gi|192315734|gb|FK011202.1|FK011202
EST:     GGAATTGGCAACACCGTGAGCATTGACTTCTGCACTTCCTGCTCTTACAA                         GGGAAATGCAGTAACAGTTAAAAACATGCTGGAATCTGAATTTCCTGGGAT
genomic: GGAATTGGCAACACCGTGAGCATTGACTTCTGCACTTCCTGCTCTTACAAgtttgttcaa ... ttttctgcagGGGAAATGCAGTAACAGTTAAAAACATGCTGGAATCTGAATTTCCTGGGAT
EST: gi|10843518|gb|BF066807.1|BF066807
EST:     GGAATTGGCAACACCGTGAGCATTGACTTCTGCACTTCCTGCTCTTACAA                         GGGAAATGCAGTAACAGTTAAAAACATGCTGGAATCTGAATTTCCTGGGAT
genomic: GGAATTGGCAACACCGTGAGCATTGACTTCTGCACTTCCTGCTCTTACAAgtttgttcaa ... ttttctgcagGGGAAATGCAGTAACAGTTAAAAACATGCTGGAATCTGAATTTCCTGGGAT