1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GTGAGAAGTGACGGTGAAATTCTCAGCCAAGTAGTGTCTTCTCAGgtacggtgtcgtattgtatgtgctgaatttgctttcgtggtttttctcagtcaagtgtgaaaaaattgtggattttggtgaaattgatgctgaattattc...
species | Glycine max |
transcript | GLYMA03G03250.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GTGAGAAGTGACGGTGAAATTCTCAGCCAAGTAGTGTCTTCTCAG GCAGACCTGCTTGCGAAATATGGAGGTGTTGCTCCAAAAATGGCAGAAGAAEST: gi|19345744|gb|BM890624.1|BM890624
genomic: GTGAGAAGTGACGGTGAAATTCTCAGCCAAGTAGTGTCTTCTCAGgtacggtgtc ... ccaaattaagGCAGACCTGCTTGCGAAATATGGAGGTGTTGCTCCAAAAATGGCAGAAGAA
EST: GTGAGAAGTGACGGTGAAATTCTCAGCCAAGTAGTGTCTTCTCAG GCAGACCTGCTTGCGAAATATGGAGGTGTTGCTCCAAAAATGGCAGAAGAAEST: gi|51345405|gb|CO986138.1|CO986138
genomic: GTGAGAAGTGACGGTGAAATTCTCAGCCAAGTAGTGTCTTCTCAGgtacggtgtc ... ccaaattaagGCAGACCTGCTTGCGAAATATGGAGGTGTTGCTCCAAAAATGGCAGAAGAA
EST: GTGAGAAGTGACGGTGAAATTCTCAGCCAAGTAGTGTCTTCTCAG GCAGACCTGCTTGCGAAATATGGAGGTGTTGCTCCAAAAATGGCAGAAGAAEST: gi|13181288|gb|BG352628.1|BG352628
genomic: GTGAGAAGTGACGGTGAAATTCTCAGCCAAGTAGTGTCTTCTCAGgtacggtgtc ... ccaaattaagGCAGACCTGCTTGCGAAATATGGAGGTGTTGCTCCAAAAATGGCAGAAGAA
EST: GTGAGAAGTGACGGTGAAATTCTCAGCCAAGTAGTGTCTTCTCAG GCAGACCTGCTTGCGAAATATGGAGGTGTTGCTCCAAAAATGGCAGAAGAA
genomic: GTGAGAAGTGACGGTGAAATTCTCAGCCAAGTAGTGTCTTCTCAGgtacggtgtc ... ccaaattaagGCAGACCTGCTTGCGAAATATGGAGGTGTTGCTCCAAAAATGGCAGAAGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGAGAAGTGACGGTGAAATTCTCAGCCAAGTAGTGTCTTCTCAGgtacggtgtcgtattgtatgtgctgaatttgctttcgtggtttttctcagtcaagtgtgaaaaaattgtggattttggtgaaattgatgctgaattattc
- AGAAGT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tgaaaaaa