1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
ACAGAGTTTAGTAATCTGCCGTCTGATCCCAATCCACGGGTTCGGTACTGTCGGAAGTGCAATCAGCTCAAGCCGCCTCGATGCCATCATTGTTCAGTTTgtgagtgttgtcgcacacagaagtttctattttgtgtattgccacgttgagatcaagtcatcgtaagtaaatttgatgttatttttggctttataccag
species | Glycine max |
transcript | GLYMA03G02930.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TCGGAAGTGCAATCAGCTCAAGCCGCCTCGATGCCATCATTGTTCAGTTT GTGGGCGCTGTGTTTTGAAGATGGACCACCATTGTGTGTGGGTAGTCAACTEST: gi|192301934|gb|FG995552.1|FG995552
genomic: TCGGAAGTGCAATCAGCTCAAGCCGCCTCGATGCCATCATTGTTCAGTTTgtgagtgttg ... tttataccagGTGGGCGCTGTGTTTTGAAGATGGACCACCATTGTGTGTGGGTAGTCAACT
EST: TCGGAAGTGCAATCAGCTCAAGCCGCCTCGATGCCATCATTGTTCAGTTT GTGGGCGCTGTGTTTTGAAGATGGACCACCATTGTGTGTGGGTAGTCAACTEST: gi|192325698|gb|FK015055.1|FK015055
genomic: TCGGAAGTGCAATCAGCTCAAGCCGCCTCGATGCCATCATTGTTCAGTTTgtgagtgttg ... tttataccagGTGGGCGCTGTGTTTTGAAGATGGACCACCATTGTGTGTGGGTAGTCAACT
EST: TCGGAAGTGCAATCAGCTCAAGCCGCCTCGATGCCATCATTGTTCAGTTT GTGGGCGCTGTGTTTTGEST: gi|27424346|gb|CA935866.1|CA935866
genomic: TCGGAAGTGCAATCAGCTCAAGCCGCCTCGATGCCATCATTGTTCAGTTTgtgagtgttg ... tttataccagGTGGGCGCTGTGTTTTG
EST: TCGGAAGTGCAATCAGCTCAAGCCGCCTCGATGCCATCATTGTTCAGTTT GTGGGCGCTGTGTTTTGAAGATGGACCACCATTGTGTGTGGGTAGTCAACTEST: gi|151408618|gb|EV278426.1|EV278426
genomic: TCGGAAGTGCAATCAGCTCAAGCCGCCTCGATGCCATCATTGTTCAGTTTgtgagtgttg ... tttataccagGTGGGCGCTGTGTTTTGAAGATGGACCACCATTGTGTGTGGGTAGTCAACT
EST: TCGGAAGTGCAATCAGCTCAAGCCGCCTCGATGCCATCATTGTTCAGTTT GTGGGCGCTGTGTTTTGAAGATGGACCACCATTGTGTGTGGGTAGTCAACT
genomic: TCGGAAGTGCAATCAGCTCAAGCCGCCTCGATGCCATCATTGTTCAGTTTgtgagtgttg ... tttataccagGTGGGCGCTGTGTTTTGAAGATGGACCACCATTGTGTGTGGGTAGTCAACT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACAGAGTTTAGTAATCTGCCGTCTGATCCCAATCCACGGGTTCGGTACTGTCGGAAGTGCAATCAGCTCAAGCCGCCTCGATGCCATCATTGTTCAGTTTgtgagtgttgtcgcacacagaagtttctattttgtgtattgccacgttgagatcaagtcatcgtaagtaaatttgatgttatttttggctttataccag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTCA