1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
CTACGGAGATAACCAAAATTAGCCCTGTTGGTGGGGGTTGTATCAATCTTGCTAGTCGCTACGACACCGATGCTGGTTCATTCTTTGTTAAAACAAACAGgtatagcacatgggagatgggaccttctgtttttggtttcgtggatgaggtttgcctcaggattgaatttttcattttgaatgtgttgcattgtttcaattttattaaagcaaaagctttatattatacatgacaagttctatgttgttgaaagttgaaactctatatcag
species | Glycine max |
transcript | GLYMA03G01960.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GCTAGTCGCTACGACACCGATGCTGGTTCATTCTTTGTTAAAACAAACAG GAGTATTGGACCATCCATGTTTGAAGCTGAGGCTCTTGGTTTAGGAGCTATEST: gi|192318364|gb|FK007282.1|FK007282
genomic: GCTAGTCGCTACGACACCGATGCTGGTTCATTCTTTGTTAAAACAAACAGgtatagcaca ... tctatatcagGAGTATTGGACCATCCATGTTTGAAGCTGAGGCTCTTGGTTTAGGAGCTAT
EST: GCTAGTCGCTACGACACCGATGCTGGTTCATTCTTTGTTAAAACAAACAG GAGTATTGGACCATCCATGTTTGAAGCTGAGGCTCTTGGTTTAGGAGCTATEST: gi|298191837|gb|HO035919.1|HO035919
genomic: GCTAGTCGCTACGACACCGATGCTGGTTCATTCTTTGTTAAAACAAACAGgtatagcaca ... tctatatcagGAGTATTGGACCATCCATGTTTGAAGCTGAGGCTCTTGGTTTAGGAGCTAT
EST: GCTAGTCGCTACGACACCGATGCTGGTTCATTCTTTGTTAAAACAAACAG GAGTATTGGACCATCCATGTTTGAAGCTGAGGCTCTTGGTTTAGGAGCTATEST: gi|209708526|gb|BW668137.1|BW668137
genomic: GCTAGTCGCTACGACACCGATGCTGGTTCATTCTTTGTTAAAACAAACAGgtatagcaca ... tctatatcagGAGTATTGGACCATCCATGTTTGAAGCTGAGGCTCTTGGTTTAGGAGCTAT
EST: GCTAGTCGCTACGACACCGATGCTGGTTCATTCTTTGTTAAAACAAACAG GAGTATTGGACCATCCATGTTTGAAGCTGAGGCTCTTGGTTTAGGAGCTATEST: gi|120496729|gb|EH224896.1|EH224896
genomic: GCTAGTCGCTACGACACCGATGCTGGTTCATTCTTTGTTAAAACAAACAGgtatagcaca ... tctatatcagGAGTATTGGACCATCCATGTTTGAAGCTGAGGCTCTTGGTTTAGGAGCTAT
EST: GCTAGTCGCTACGACACCGATGCTGGTTCATTCTTTGTTAAAACAAACAG GAGTATTGGACCATCCATGTTTGAAGCTGAGGCTCTTGGTTTAGGAGCTATEST: gi|6133930|gb|AW132323.1|AW132323
genomic: GCTAGTCGCTACGACACCGATGCTGGTTCATTCTTTGTTAAAACAAACAGgtatagcaca ... tctatatcagGAGTATTGGACCATCCATGTTTGAAGCTGAGGCTCTTGGTTTAGGAGCTAT
EST: GCTAGTCGCTACGACACCGATGCTGGTTCATTCTTTGTTAAAACAAACAG GAGTATTGGACCATCCATGTTTGAAGCTGAGGCTCTTGGTTTAGGAGCTATEST: gi|298164909|gb|HO010906.1|HO010906
genomic: GCTAGTCGCTACGACACCGATGCTGGTTCATTCTTTGTTAAAACAAACAGgtatagcaca ... tctatatcagGAGTATTGGACCATCCATGTTTGAAGCTGAGGCTCTTGGTTTAGGAGCTAT
EST: GCTAGTCGCTACGACACCGATGCTGGTTCATTCTTTGTTAAAACAAACAG GAGTATTGGACCATCCATGTTTGAAGCTGAGGCTCTTGGTTTAGGAGCTAT
genomic: GCTAGTCGCTACGACACCGATGCTGGTTCATTCTTTGTTAAAACAAACAGgtatagcaca ... tctatatcagGAGTATTGGACCATCCATGTTTGAAGCTGAGGCTCTTGGTTTAGGAGCTAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTACGGAGATAACCAAAATTAGCCCTGTTGGTGGGGGTTGTATCAATCTTGCTAGTCGCTACGACACCGATGCTGGTTCATTCTTTGTTAAAACAAACAGgtatagcacatgggagatgggaccttctgtttttggtttcgtggatgaggtttgcctcaggattgaatttttcattttgaatgtgttgcattgtttcaattttattaaagcaaaagctttatattatacatgacaagttctatgttgttgaaagttgaaactctatatcag
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