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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATTCCATTTTCATCCATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAGgtctttcatcaaacattttggcttttatatatagagagtgtttttatacccttttatttgctagttgacttcatatgtttgatttctatag

Basic information

species Glycine max
transcript GLYMA02G47860.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208133711|gb|GD928340.1|GD928340
EST:     ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAG                         ATGTTTGCATTGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
genomic: ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAGgtctttcatc ... atttctatagATGTTTGCATTGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
EST: gi|193315220|gb|FK282616.1|FK282616
EST:     ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAG                         ATGTTTGCATTGTTGGTGTTGCACGTACACCAAT
genomic: ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAGgtctttcatc ... atttctatagATGTTTGCATTGTTGGTGTTGCACGTACACCAAT
EST: gi|298197389|gb|HO044868.1|HO044868
EST:     ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAG                         ATGTTTGCATTGTTAGTGTTGCACGTACACCAATGTGTGGATTTCTTGGTA
genomic: ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAGgtctttcatc ... atttctatagATGTTTGCATTGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
EST: gi|193306951|gb|FK268803.1|FK268803
EST:     ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAG                         ATGTTTGCATTGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
genomic: ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAGgtctttcatc ... atttctatagATGTTTGCATTGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
EST: gi|193376725|gb|FK340920.1|FK340920
EST:     ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAG                         ATGTTTGCATTGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
genomic: ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAGgtctttcatc ... atttctatagATGTTTGCATTGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
EST: gi|207793311|gb|GD765595.1|GD765595
EST:     ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAG                         ATGTTTGCATTGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
genomic: ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAGgtctttcatc ... atttctatagATGTTTGCATTGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
EST: gi|193307600|gb|FK270628.1|FK270628
EST:     ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAG                         ATGTTTGCATTGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
genomic: ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAGgtctttcatc ... atttctatagATGTTTGCATTGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
EST: gi|208133993|gb|GD927866.1|GD927866
EST:     ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAG                         ATGTTTGCATTGTTGGTGTTGCACGTACACCAATGG
genomic: ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAGgtctttcatc ... atttctatagATGTTTGCATTGTTGGTGTTGCACGTACACCAATGG
EST: gi|193369201|gb|FK337093.1|FK337093
EST:     ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAG                         ATGTTTGCATTGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
genomic: ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAGgtctttcatc ... atttctatagATGTTTGCATTGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
EST: gi|208032921|gb|GD829978.1|GD829978
EST:     ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAG                         ATGTTTGCATTGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
genomic: ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAGgtctttcatc ... atttctatagATGTTTGCATTGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
EST: gi|298168588|gb|HO009518.1|HO009518
EST:     ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAG                         ATGTTTGCATTGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA
genomic: ATCAATGGCTCCAGTAGCAGCAGCATCTTCAGATTCAATCAAGCCAAGAGgtctttcatc ... atttctatagATGTTTGCATTGTTGGTGTTGCACGTACACCAATGGGTGGATTTCTTGGTA