1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GTATGGTTTCAAGAAGGCTAATATTGGGAAGGATTTGGCCCTGCATGCATGCGCCGGGGAGCCTCCCCTCGCATTCCTCGACTCTCTTCTTCTTGGAGAGgtattttgcacatggaaaacgcttaacatcctcttttcttgttaccctttgtttcaaagtttctaaattttaccctttcatggcag
species | Glycine max |
transcript | GLYMA02G46230.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GCGCCGGGGAGCCTCCCCTCGCATTCCTCGACTCTCTTCTTCTTGGAGAG TGGGAAGATCGCATGCAGAGAGGACTTTTTCGCTATGATGTTACCGCCTGTEST: gi|11413167|gb|BF425178.1|BF425178
genomic: GCGCCGGGGAGCCTCCCCTCGCATTCCTCGACTCTCTTCTTCTTGGAGAGgtattttgca ... ttcatggcagTGGGAAGATCGCATGCAGAGAGGACTTTTTCGCTATGATGTTACCGCCTGT
EST: CTTCTTGGAGAG TGGGAAGATCGCATGCAGAGAGGACTTTTTCGCTATGATGTTACCGCCTGTEST: gi|7326625|gb|AW620423.1|AW620423
genomic: CTTCTTGGAGAGgtattttgca ... ttcatggcagTGGGAAGATCGCATGCAGAGAGGACTTTTTCGCTATGATGTTACCGCCTGT
EST: GCGCCGGGGAGCCTCCCCTCGCATTCCTCGACTCTCTTCTTCTTGGAGAG TGGGAAGATCGCATGCAGAGAGGACTTTTTCGCTATGATGTTACCGCCTGTEST: gi|27445855|gb|CA952978.1|CA952978
genomic: GCGCCGGGGAGCCTCCCCTCGCATTCCTCGACTCTCTTCTTCTTGGAGAGgtattttgca ... ttcatggcagTGGGAAGATCGCATGCAGAGAGGACTTTTTCGCTATGATGTTACCGCCTGT
EST: GCGCCGGGGAGCCTCCCCTCGCATTCCTCGACTCTCTTCTTCTTGGAGAG TGGGAAGATCGCATGCAGAGAGGACTTTTTCGCTATGATGTTACCGCCTGTEST: gi|193526304|gb|FK481604.1|FK481604
genomic: GCGCCGGGGAGCCTCCCCTCGCATTCCTCGACTCTCTTCTTCTTGGAGAGgtattttgca ... ttcatggcagTGGGAAGATCGCATGCAGAGAGGACTTTTTCGCTATGATGTTACCGCCTGT
EST: GCGCCGGGGAGCCTCCCCTCGCATTCCTCGACTCTCTTCTTCTTGGAGAG TGGGAAGATCGCATGCAGAGAGGACTTTTTCGCTATGATGTTACCGCCTGTEST: gi|22541283|gb|BU091126.1|BU091126
genomic: GCGCCGGGGAGCCTCCCCTCGCATTCCTCGACTCTCTTCTTCTTGGAGAGgtattttgca ... ttcatggcagTGGGAAGATCGCATGCAGAGAGGACTTTTTCGCTATGATGTTACCGCCTGT
EST: GCGCCGGGGAGCCTCCCCTCGCATTCCTCGACTCTCTTCTTCTTGGAGAG TGGGAAGATCGCATGCAGAGAGGACTTTTTCGCTATGATGTTACCGCCTGTEST: gi|14205548|gb|BG839226.1|BG839226
genomic: GCGCCGGGGAGCCTCCCCTCGCATTCCTCGACTCTCTTCTTCTTGGAGAGgtattttgca ... ttcatggcagTGGGAAGATCGCATGCAGAGAGGACTTTTTCGCTATGATGTTACCGCCTGT
EST: GCGCCGGGGAGCCTCCCCTCGCATTCCTCGACTCTCTTCTTCTTGGAGAG TGGGAAGATCGCATGCAGAGAGGACTTTTTCGCTATGATGTTACCGCMTGT
genomic: GCGCCGGGGAGCCTCCCCTCGCATTCCTCGACTCTCTTCTTCTTGGAGAGgtattttgca ... ttcatggcagTGGGAAGATCGCATGCAGAGAGGACTTTTTCGCTATGATGTTACCGCCTGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTATGGTTTCAAGAAGGCTAATATTGGGAAGGATTTGGCCCTGCATGCATGCGCCGGGGAGCCTCCCCTCGCATTCCTCGACTCTCTTCTTCTTGGAGAGgtattttgcacatggaaaacgcttaacatcctcttttcttgttaccctttgtttcaaagtttctaaattttaccctttcatggcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA