1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GTTTTAATTTTGTTTCTCAAGTTCAGCTTCTTGCTGTACAAGTAATAGACTATTATTAGACTTGCCAGAAATCACCAACTGGGTTGCTCTTTCTAACCAGgtatgctgagggtcggattcttttttcttttcaagcaagaaagctgtttatgtgcaggaattctaagattaatagaatgttatatgcatatagtatacaa...
species | Glycine max |
transcript | GLYMA02G43610.3 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TATTATTAGACTTGCCAGAAATCACCAACTGGGTTGCTCTTTCTAACCAG GTTCTCTAAGTCAACTTTCAGTTTTTGATTGTTGAGGATGGTGCTGGTTTTEST: gi|208295859|gb|GE093536.1|GE093536
genomic: TATTATTAGACTTGCCAGAAATCACCAACTGGGTTGCTCTTTCTAACCAGgtatgctgag ... gtttctgcagGTTCTCTAAGTCAACTTTCTGTTTTTGATTGTTGAGGATGGTGCTGGTTTT
EST: TATTATTAGACTTGCCAGAAATCACCAACTGGGTTGCTCTTTCTAACCAG GTTCTCTAAGTCAACTTTCAGTTTT-GTATTGTTGAGGATGGTGCTGGTTTEST: gi|15285030|gb|BI468921.1|BI468921
genomic: TATTATTAGACTTGCCAGAAATCACCAACTGGGTTGCTCTTTCTAACCAGgtatgctgag ... gtttctgcagGTTCTCTAAGTCAACTTTCTGTTTTTG-ATTGTTGAGGATGGTGCTGGTTT
EST: TATTATTAGACTTGCCAGAAATCACCAACTGGGTTGCTCTTTCTAACCAG GTTCTCTAAGTCAACTTTCAGTTTTTGATTGTTGAGGATGGTGCTGGTTTTEST: gi|298163806|gb|HO012539.1|HO012539
genomic: TATTATTAGACTTGCCAGAAATCACCAACTGGGTTGCTCTTTCTAACCAGgtatgctgag ... gtttctgcagGTTCTCTAAGTCAACTTTCTGTTTTTGATTGTTGAGGATGGTGCTGGTTTT
EST: ATTATTAGACTTGCCAGAAATCACCAACTGGGTTGGCTCTTTCTAACCAG GTTCTCTAAGTCAACTTTCAGTTTTTGATTGTTGAGGATGGTGCTGGTTTTEST: gi|298195454|gb|HO043845.1|HO043845
genomic: ATTATTAGACTTGCCAGAAATCACCAACTGGGTTG-CTCTTTCTAACCAGgtatgctgag ... gtttctgcagGTTCTCTAAGTCAACTTTCTGTTTTTGATTGTTGAGGATGGTGCTGGTTTT
EST: ATTATTAGACTTGCCAGAAATCACCAACTGGGTTGGCTCTTTCTAACCAG GTTCTCTAAGTCAACTTTCAGTTTTTGATTGTTGAGGATGGTGCTGGTTTTEST: gi|23057396|gb|BU578070.1|BU578070
genomic: ATTATTAGACTTGCCAGAAATCACCAACTGGGTTG-CTCTTTCTAACCAGgtatgctgag ... gtttctgcagGTTCTCTAAGTCAACTTTCTGTTTTTGATTGTTGAGGATGGTGCTGGTTTT
EST: TATTATTAGACTTGCCAGAAATCACCAACTGGGTTGCTCTTTCTAACCAG GTTCTCTAAGTCAACTTTCTGTTTTTGATTGTTGAGGATGNGTGCTGGTTT
genomic: TATTATTAGACTTGCCAGAAATCACCAACTGGGTTGCTCTTTCTAACCAGgtatgctgag ... gtttctgcagGTTCTCTAAGTCAACTTTCTGTTTTTGATTGTTGAGGATG-GTGCTGGTTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTTTAATTTTGTTTCTCAAGTTCAGCTTCTTGCTGTACAAGTAATAGACTATTATTAGACTTGCCAGAAATCACCAACTGGGTTGCTCTTTCTAACCAGgtatgctgagggtcggattcttttttcttttcaagcaagaaagctgtttatgtgcaggaattctaagattaatagaatgttatatgcatatagtatacaa
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