1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GACGACGTGGATGGAACCTGAGTGTGACAAACTCATCATGGCTGCCATTAACAAAAATTACGTCGACATGGATGAGTACCCTGTCACCACTGAGCTCCAGgcaagtatcacatataccatacttgatattaatcaattattaatgtcgttcaattaaggatgagagataacatatactatattcgtaggagtattaattt...
species | Glycine max |
transcript | GLYMA02G40840.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: ACAAAAATTACGTCGACATGGATGAGTACCCTGTCACCACTGAGCTCCAT AACCGGTGTGTTAACATGATAGCTCACCTTTTCAATGCACCACTAGAAGAGEST: gi|16277122|gb|BI942215.1|BI942215
genomic: ACAAAAATTACGTCGACATGGATGAGTACCCTGTCACCACTGAGCTCCAGgcaagtatca ... atgcatgtagAACCGGTGTGTTAACATGATAGCTCACCTTTTCAATGCACCACTAGAAGAG
EST: ACAAAAATTACGTCGACATGGATGAGTACCCTGTCACCACTGAGCTCCAG AACCGGTGTGTTAACATGATAGCTCACCTTTTCAATGCACCACTAGAAGAGEST: gi|213608150|gb|DB963052.1|DB963052
genomic: ACAAAAATTACGTCGACATGGATGAGTACCCTGTCACCACTGAGCTCCAGgcaagtatca ... atgcatgtagAACCGGTGTGTTAACATGATAGCTCACCTTTTCAATGCACCACTAGAAGAG
EST: ACAAAAATTACGTCGACATGGATGAGTACCCTGTCACCACTGAGCTCCAG AACCGGTGTGTTAACATGATAGCTCACCTTTTCAATGCACCACTAGAAGAGEST: gi|298171934|gb|HO021526.1|HO021526
genomic: ACAAAAATTACGTCGACATGGATGAGTACCCTGTCACCACTGAGCTCCAGgcaagtatca ... atgcatgtagAACCGGTGTGTTAACATGATAGCTCACCTTTTCAATGCACCACTAGAAGAG
EST: ACAAAAATTACGTCGACATGGATGAGTACCCTGTCACCACTGAGCTCCAG AACCGGTGTGTTAACATGATAGCTCACCTTTTCAATGCACCACTAGAAGAG
genomic: ACAAAAATTACGTCGACATGGATGAGTACCCTGTCACCACTGAGCTCCAGgcaagtatca ... atgcatgtagAACCGGTGTGTTAACATGATAGCTCACCTTTTCAATGCACCACTAGAAGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GACGACGTGGATGGAACCTGAGTGTGACAAACTCATCATGGCTGCCATTAACAAAAATTACGTCGACATGGATGAGTACCCTGTCACCACTGAGCTCCAGgcaagtatcacatataccatacttgatattaatcaattattaatgtcgttcaattaaggatgagagataacatatactatattcgtaggagtattaattt
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